RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CATSPER2Q96P56 530 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 KLK14Q9P0G3 267 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 MORF4L1Q9UBU8 362 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 APPL1Q9UKG1 709 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 TPP1O14773 563 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 GLRA3O75311 464 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 DESP17661 470 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 SNX16P57768 344 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 BST2Q10589 180 aaKnown RBP19.35■□□□□ 0.69
SNX4-201ENST00000251775 PAOXQ6QHF9 649 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 CDKL3Q8IVW4 592 aaPredicted RBP19.35■□□□□ 0.69
SNX4-201ENST00000251775 CCDC185Q8N715 623 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 CNBD2Q96M20 576 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 KCTD15Q96SI1 283 aaPredicted RBP19.35■□□□□ 0.69
SNX4-201ENST00000251775 FAM96AQ9H5X1 160 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 MOCS1Q9NZB8 636 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 AP4E1Q9UPM8 1137 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 ZNF510Q9Y2H8 683 aa19.35■□□□□ 0.69
SNX4-201ENST00000251775 TRIP12Q14669 1992 aaPredicted RBP19.35■□□□□ 0.69
SNX4-201ENST00000251775 CCL15-CCL14A0A0B4J2E2 113 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 RRN3P2A6NIE6 340 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 ZNF487B1APH4 448 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 PIRO00625 290 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 TNFAIP8O95379 198 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 YBX3P16989 372 aaKnown RBP eCLIP19.34■□□□□ 0.69
SNX4-201ENST00000251775 CNTFP26441 200 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 PRDX6P30041 224 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 EMP3P54852 163 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 APOFQ13790 326 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 CCL15Q16663 113 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 TICAM1Q8IUC6 712 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 ACMSDQ8TDX5 336 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 GAB3Q8WWW8 586 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 BRI3BPQ8WY22 251 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 TINF2Q9BSI4 451 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 RTKNQ9BST9 563 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 ZNF408Q9H9D4 720 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 TIMMDC1Q9NPL8 285 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 MFHAS1Q9Y4C4 1052 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 NR2E3Q9Y5X4 410 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 SRGAP2BP0DMP2 458 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 DARSP14868 501 aaKnown RBP19.34■□□□□ 0.69
SNX4-201ENST00000251775 CD1EP15812 388 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 GRIA1P42261 906 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 GRB14Q14449 540 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 HSP90AA5PQ58FG0 334 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 FBXO47Q5MNV8 452 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 CRYBG2Q8N1P7 616 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 NPLOC4Q8TAT6 608 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 ABHD16BQ9H3Z7 469 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 STK39Q9UEW8 545 aa19.34■□□□□ 0.69
SNX4-201ENST00000251775 UBQLN1Q9UMX0 589 aaKnown RBP19.34■□□□□ 0.69
SNX4-201ENST00000251775 SMIM10L2AP0DMW4 78 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 SMIM10L2BP0DMW5 78 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 GRK2P25098 689 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 GNL1P36915 607 aaPredicted RBP19.33■□□□□ 0.69
SNX4-201ENST00000251775 RPL34P49207 117 aaKnown RBP19.33■□□□□ 0.69
SNX4-201ENST00000251775 BCAT1P54687 386 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 KLF10Q13118 480 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 CYLC2Q14093 348 aaPredicted RBP19.33■□□□□ 0.69
SNX4-201ENST00000251775 USP41Q3LFD5 358 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 IYDQ6PHW0 289 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 KCNT2Q6UVM3 1135 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 ALDH16A1Q8IZ83 802 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 MIPOL1Q8TD10 442 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 TMEM40Q8WWA1 233 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 CSPG4P5Q96PW8 444 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 PRPF18Q99633 342 aaKnown RBP19.33■□□□□ 0.69
SNX4-201ENST00000251775 RIMS3Q9UJD0 308 aa19.33■□□□□ 0.69
SNX4-201ENST00000251775 MYO18AQ92614 2054 aaKnown RBP19.33■□□□□ 0.69
SNX4-201ENST00000251775 SMIM28A0A1B0GU29 152 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 KPNA7A9QM74 516 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 GCATO75600 419 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 SLC5A2P31639 672 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 HARS2P49590 506 aaKnown RBP19.33■□□□□ 0.68
SNX4-201ENST00000251775 ABCE1P61221 599 aaKnown RBP19.33■□□□□ 0.68
SNX4-201ENST00000251775 ADGRE1Q14246 886 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 RARS2Q5T160 578 aaKnown RBP19.33■□□□□ 0.68
SNX4-201ENST00000251775 IQSEC1Q6DN90 963 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 PYROXD2Q8N2H3 581 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 RNF39Q9H2S5 420 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 GOLGA2P5Q9HBQ8 144 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 MAN1C1Q9NR34 630 aa19.33■□□□□ 0.68
SNX4-201ENST00000251775 DYNC1LI2O43237 492 aaPredicted RBP19.32■□□□□ 0.68
SNX4-201ENST00000251775 CYP2C9P11712 490 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 CLCN2P51788 898 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 SLC2A14Q8TDB8 520 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 NDRG1Q92597 394 aaKnown RBP19.32■□□□□ 0.68
SNX4-201ENST00000251775 ADARP55265 1226 aaKnown RBP19.32■□□□□ 0.68
SNX4-201ENST00000251775 MRPS22P82650 360 aaKnown RBP19.32■□□□□ 0.68
SNX4-201ENST00000251775 PRAMEF19Q5SWL8 479 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 NCBP2-AS2Q69YL0 99 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 BORAQ6PGQ7 559 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 LRGUKQ96M69 825 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 QKIQ96PU8 341 aaKnown RBP eCLIP19.32■□□□□ 0.68
SNX4-201ENST00000251775 MRPL1Q9BYD6 325 aaKnown RBP19.32■□□□□ 0.68
SNX4-201ENST00000251775 DTLQ9NZJ0 730 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 COPG2Q9UBF2 871 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 SLC45A1Q9Y2W3 748 aa19.32■□□□□ 0.68
SNX4-201ENST00000251775 E9PBE3 544 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms