RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 NFS1Q9Y697 457 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 ZFP37Q9Y6Q3 630 aaPredicted RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 GOLGA6CA6NDK9 693 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 RASA4BC9J798 803 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 RASA4O43374 803 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 OLFM2O95897 454 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 KLKB1P03952 638 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 GOLGA6DP0CG33 693 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 EPCAMP16422 314 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 PSMB4P28070 264 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 SLC6A4P31645 630 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 IRAK1P51617 712 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 CDH4P55283 916 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 YBEYP58557 167 aaPredicted RBP19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 GAD2Q05329 585 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 ZNF844Q08AG5 666 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 KRT71Q3SY84 523 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 PARP15Q460N3 678 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 C5orf22Q49AR2 442 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 ARHGAP15Q53QZ3 475 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 DNAJC21Q5F1R6 531 aaKnown RBP19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 CIR1Q86X95 450 aaPredicted RBP19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 CFAP52Q8N1V2 620 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 LEMD2Q8NC56 503 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 TTC16Q8NEE8 873 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 SLC22A12Q96S37 553 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 CERS4Q9HA82 394 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 GOLGA6AQ9NYA3 693 aa19.16■□□□□ 0.66
TNFSF9-201ENST00000245817 TYW5A2RUC4 315 aaKnown RBP19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 F5H423 210 aaPredicted RBP19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 PER2O15055 1255 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 ZBTB24O43167 697 aaPredicted RBP19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 RNF40O75150 1001 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 RFPL2O75678 378 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 DDX6P26196 483 aaKnown RBP eCLIP19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 ZBTB17Q13105 803 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 HP1BP3Q5SSJ5 553 aaPredicted RBP19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 TTC39BQ5VTQ0 682 aaPredicted RBP19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 ARHGAP36Q6ZRI8 547 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 RBM23Q86U06 439 aaKnown RBP19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 PALM2Q8IXS6 379 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 TEKT5Q96M29 485 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 SERPINB12Q96P63 405 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 VPS37BQ9H9H4 285 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 SP110Q9HB58 689 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 XAB2Q9HCS7 855 aaKnown RBP19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 EIF2B3Q9NR50 452 aaKnown RBP19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 ZNF510Q9Y2H8 683 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 SH3BP1Q9Y3L3 701 aa19.15■□□□□ 0.66
TNFSF9-201ENST00000245817 E7ESA3 106 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 RRP9O43818 475 aaKnown RBP19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 CLDN11O75508 207 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 SHBGP04278 402 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 PHBP35232 272 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 IFI35P80217 286 aaPredicted RBP19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 SLC7A9P82251 487 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 PPP2R2DQ66LE6 453 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 ANKMY2Q8IV38 441 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 USP33Q8TEY7 942 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 HMCESQ96FZ2 354 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 ZFRQ96KR1 1074 aaKnown RBP19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 GBA3Q9H227 469 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 NKX2-4Q9H2Z4 354 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 SLC28A3Q9HAS3 691 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 ZDHHC7Q9NXF8 308 aa19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.14■□□□□ 0.66
TNFSF9-201ENST00000245817 A0A087WUV0 522 aaPredicted RBP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 TRDMT1O14717 391 aaKnown RBP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 POLR3GO15318 223 aaPredicted RBP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 PSMD3O43242 534 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 IVLP07476 585 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 ABHD2P08910 425 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 GJA1P17302 382 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 RENBPP51606 427 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 CBX1P83916 185 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 ZNF177Q13360 481 aaPredicted RBP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 C6orf118Q5T5N4 469 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 PDCD7Q8N8D1 485 aaKnown RBP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 ATP11CQ8NB49 1132 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 FBXO36Q8NEA4 188 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 ARNTL2Q8WYA1 636 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 TIFAQ96CG3 184 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 PPP1R2P1Q96PQ5 205 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 ROPN1BQ9BZX4 212 aaPredicted RBP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 NOL6Q9H6R4 1146 aaKnown RBP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 ROPN1Q9HAT0 212 aaPredicted RBP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 HCFC1R1Q9NWW0 138 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 BCCIPQ9P287 314 aaKnown RBP eCLIP19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 STOML2Q9UJZ1 356 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 TTLL3Q9Y4R7 772 aa19.14■□□□□ 0.65
TNFSF9-201ENST00000245817 TLDC2A0PJX2 215 aa19.13■□□□□ 0.65
TNFSF9-201ENST00000245817 ERI2A8K979 691 aaKnown RBP19.13■□□□□ 0.65
TNFSF9-201ENST00000245817 TSPAN3O60637 253 aa19.13■□□□□ 0.65
TNFSF9-201ENST00000245817 RHOP08100 348 aa19.13■□□□□ 0.65
TNFSF9-201ENST00000245817 AVPR1AP37288 418 aa19.13■□□□□ 0.65
TNFSF9-201ENST00000245817 RPS24P62847 133 aaKnown RBP19.13■□□□□ 0.65
TNFSF9-201ENST00000245817 FASTKD3Q14CZ7 662 aaKnown RBP19.13■□□□□ 0.65
TNFSF9-201ENST00000245817 MSS51Q4VC12 460 aa19.13■□□□□ 0.65
TNFSF9-201ENST00000245817 CCDC38Q502W7 563 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms