RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 FGBP02675 491 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 CSH1P0DML2 217 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 CSH2P0DML3 217 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 MLNP12872 115 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 KRT15P19012 456 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 ATP5DP30049 168 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 MSH2P43246 934 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 SARNPP82979 210 aaKnown RBP13.72□□□□□ -0.21
NUP85-201ENST00000245544 HTRA4P83105 476 aaPredicted RBP13.72□□□□□ -0.21
NUP85-201ENST00000245544 COG7P83436 770 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 SMAD1Q15797 465 aaKnown RBP13.72□□□□□ -0.21
NUP85-201ENST00000245544 FAM133BQ5BKY9 247 aaKnown RBP13.72□□□□□ -0.21
NUP85-201ENST00000245544 CASC4Q6P4E1 433 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 CES3Q6UWW8 571 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 DNAJB7Q7Z6W7 309 aaPredicted RBP13.72□□□□□ -0.21
NUP85-201ENST00000245544 CHSY1Q86X52 802 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 C4orf33Q8N1A6 199 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 CFAP52Q8N1V2 620 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 UMODL1-AS1Q8N2C9 162 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 ANKRD42Q8N9B4 389 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 BCAS4Q8TDM0 211 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 MZB1Q8WU39 189 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 LRRC39Q96DD0 335 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 MYRFLQ96LU7 910 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 CEP295NLQ96MC4 621 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 RPRD1AQ96P16 312 aaPredicted RBP13.72□□□□□ -0.21
NUP85-201ENST00000245544 NACA2Q9H009 215 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 ZBP1Q9H171 429 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 EPN3Q9H201 632 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 ZNF334Q9HCZ1 680 aaPredicted RBP13.72□□□□□ -0.21
NUP85-201ENST00000245544 SYBUQ9NX95 663 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 HSFX1Q9UBD0 423 aa13.72□□□□□ -0.21
NUP85-201ENST00000245544 PLXNA4Q9HCM2 1894 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 DRGXA6NNA5 263 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 TRDMT1O14717 391 aaKnown RBP13.71□□□□□ -0.21
NUP85-201ENST00000245544 MATN3O15232 486 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 PEX11BO96011 259 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 MT-CYBP00156 380 aaPredicted RBP13.71□□□□□ -0.21
NUP85-201ENST00000245544 KLKB1P03952 638 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 CNPP09543 421 aaKnown RBP13.71□□□□□ -0.21
NUP85-201ENST00000245544 TACR2P21452 398 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 ZNF33AQ06730 810 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 TAF12Q16514 161 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 TMEM240Q5SV17 173 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 LEKR1Q6ZMV7 388 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 FIBCD1Q8N539 461 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 KLHL23Q8NBE8 558 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 OVCA2Q8WZ82 227 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 STAMBPL1Q96FJ0 436 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 VAT1Q99536 393 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 IL12RB2Q99665 862 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 TRABDQ9H4I3 376 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 INTS9Q9NV88 658 aaKnown RBP13.71□□□□□ -0.21
NUP85-201ENST00000245544 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 FETUBQ9UGM5 382 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 IPO11Q9UI26 975 aaKnown RBP13.71□□□□□ -0.21
NUP85-201ENST00000245544 HBS1LQ9Y450 684 aaKnown RBP13.71□□□□□ -0.21
NUP85-201ENST00000245544 PCDHB12Q9Y5F1 795 aa13.71□□□□□ -0.21
NUP85-201ENST00000245544 SDR42E2A6NKP2 422 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 A6NNZ2 444 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 SPAG6O75602 509 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 SUN1O94901 812 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 HLA-DQB2P05538 268 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 ELF1P32519 619 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 IFNAR2P48551 515 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 RASA2Q15283 850 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 ZSCAN26Q16670 478 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 TUBB8Q3ZCM7 444 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 NUGGCQ68CJ6 796 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 ITPRIPL1Q6GPH6 555 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 DENND1CQ8IV53 801 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 CTAGE3PQ8IX95 158 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 TCEAL8Q8IYN2 117 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 PPM1NQ8N819 430 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 PDZD8Q8NEN9 1154 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 GSDMBQ8TAX9 411 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 SLC44A1Q8WWI5 657 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 SLC22A12Q96S37 553 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 CYP2S1Q96SQ9 504 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 KLF6Q99612 283 aaPredicted RBP13.7□□□□□ -0.22
NUP85-201ENST00000245544 ZBED2Q9BTP6 218 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 FAM107BQ9H098 131 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 TMEM51Q9NW97 253 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 IL1RAPL1Q9NZN1 696 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 SLC17A6Q9P2U8 582 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 PCDHA11Q9Y5I1 949 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 INSL5Q9Y5Q6 135 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 SCAMP3O14828 347 aaKnown RBP13.7□□□□□ -0.22
NUP85-201ENST00000245544 TGM5O43548 720 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 CACNG3O60359 315 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 TPH1P17752 444 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 PRKCHP24723 683 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 STX2P32856 288 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 PPM1AP35813 382 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 FPGSQ05932 587 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 SPRED2Q7Z698 418 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 LGI2Q8N0V4 545 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 ZNF276Q8N554 614 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 PSMG2Q969U7 264 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 TRMT2BQ96GJ1 504 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms