RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TSPAN14Q8NG11 270 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 CALML6Q8TD86 181 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 SEMA4DQ92854 862 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 ZNF669Q96BR6 464 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 PAFAH2Q99487 392 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 NAT9Q9BTE0 207 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 OSBPL6Q9BZF3 934 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 ELOVL4Q9GZR5 314 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 MRPL46Q9H2W6 279 aaKnown RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 C20orf96Q9NUD7 363 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 RNF19AQ9NV58 838 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 UXTQ9UBK9 157 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 TUBGCP4Q9UGJ1 667 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 TMA7Q9Y2S6 64 aaKnown RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 COQ6Q9Y2Z9 468 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 PKP3Q9Y446 797 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 GPC6Q9Y625 555 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 B4GALT4O60513 344 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 CNOT3O75175 753 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 DUSP11O75319 330 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 PMPCBO75439 489 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 CALCAP01258 141 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 ASGR1P07306 291 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 ZNF24P17028 368 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 CRABP2P29373 138 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 PPM1AP35813 382 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 OXCT1P55809 520 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 NOMO3P69849 1222 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 SULT2A1Q06520 285 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 NDUFA5Q16718 116 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 SLC39A12Q504Y0 691 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 CCDC149Q6ZUS6 474 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 FBXO36Q8NEA4 188 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 TRPC4APQ8TEL6 797 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 SPATA17Q96L03 361 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 KREMEN1Q96MU8 473 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 UPF3AQ9H1J1 476 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 MRPL40Q9NQ50 206 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 RBPJLQ9UBG7 517 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 FADS3Q9Y5Q0 445 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 SF3B1O75533 1304 aaKnown RBP eCLIP11.19□□□□□ -0.624e-6■■■■■ 63.2
COPA-201ENST00000241704 SMIM35A0A1B0GVV1 85 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 NCAM2O15394 837 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 HSPA8P11142 646 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 PORP16435 677 aaPredicted RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 NUMBP49757 651 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 PTRHD1Q6GMV3 140 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 UNC45BQ8IWX7 931 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 HS6ST3Q8IZP7 471 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 RBM15BQ8NDT2 890 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 CSGALNACT1Q8TDX6 532 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 BORCS6Q96GS4 357 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 HAPLN3Q96S86 360 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 ZNF229Q9UJW7 825 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 SHOC2Q9UQ13 582 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 TCEA3O75764 348 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 MMP3P08254 477 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 ACADMP11310 421 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 GFAPP14136 432 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 MGAT5Q09328 741 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 USP10Q14694 798 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 KIF19Q2TAC6 998 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 TTC27Q6P3X3 843 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 CYP4X1Q8N118 509 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 ZCCHC9Q8N567 271 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 GSTCDQ8NEC7 633 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 HELQQ8TDG4 1101 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 XPNPEP1Q9NQW7 623 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 CRLS1Q9UJA2 301 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 MYRFQ9Y2G1 1151 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 MYH2Q9UKX2 1941 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 ZNF536O15090 1300 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 NUP98P52948 1817 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 TUBGCP6Q96RT7 1819 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 BOLA2-SMG1P6H3BVE0 249 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 INHAP05111 366 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 GM2AP17900 193 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 HADHAP40939 763 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 AQP4P55087 323 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 ACTR3P61158 418 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 SLC1A5Q15758 541 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 NADK2Q4G0N4 442 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 PABPC1LQ4VXU2 614 aaKnown RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 ARMC6Q6NXE6 501 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 DENND5BQ6ZUT9 1274 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 DEFB107AQ8IZN7 70 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 DEFB106AQ8N104 65 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
COPA-201ENST00000241704 GIPC2Q8TF65 315 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 EDEM1Q92611 657 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 RMND5BQ96G75 393 aaPredicted RBP11.19□□□□□ -0.62
COPA-201ENST00000241704 SHCBP1LQ9BZQ2 653 aa11.19□□□□□ -0.62
COPA-201ENST00000241704 SDR42E2A6NKP2 422 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 SEPT4O43236 478 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 EFCAB14O75071 495 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 DEAF1O75398 565 aaPredicted RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 SERPIND1P05546 499 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 CRHR2Q13324 411 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 TCHHL1Q5QJ38 904 aaPredicted RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 RETSATQ6NUM9 610 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms