RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 LIASO43766 372 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 RASSF9O75901 435 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 SDHAP31040 664 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 CHKAP35790 457 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 SLC26A2P50443 739 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 SLC18A1P54219 525 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 GSCP56915 257 aaPredicted RBP8.2□□□□□ -1.1
CXCR4-201ENST00000241393 PHC1P78364 1004 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 PWP2Q15269 919 aaKnown RBP8.2□□□□□ -1.1
CXCR4-201ENST00000241393 MAPK6Q16659 721 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 IZUMO3Q5VZ72 239 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 DNAJC24Q6P3W2 148 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 DEFB132Q7Z7B7 95 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 TDRPQ86YL5 185 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 FNIP1Q8TF40 1166 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 SLITRK1Q96PX8 696 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 ACO2Q99798 780 aaKnown RBP8.2□□□□□ -1.1
CXCR4-201ENST00000241393 MENTQ9BUN1 341 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 FAM124BQ9H5Z6 455 aaPredicted RBP8.2□□□□□ -1.1
CXCR4-201ENST00000241393 ZNF552Q9H707 407 aaPredicted RBP8.2□□□□□ -1.1
CXCR4-201ENST00000241393 UBN1Q9NPG3 1134 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 NINJ2Q9NZG7 142 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 DTLQ9NZJ0 730 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 CPSF3Q9UKF6 684 aaKnown RBP8.2□□□□□ -1.1
CXCR4-201ENST00000241393 SPEF1Q9Y4P9 236 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 DOCK5Q9H7D0 1870 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 WDR90Q96KV7 1748 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 SMIM23A6NLE4 172 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 O00370 1275 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 DNALI1O14645 258 aaPredicted RBP8.19□□□□□ -1.1
CXCR4-201ENST00000241393 B4GALT4O60513 344 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 ACSL3O95573 720 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 OAS1P00973 400 aaKnown RBP8.19□□□□□ -1.1
CXCR4-201ENST00000241393 CALCAP01258 141 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 PFKLP17858 780 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 PROZP22891 400 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 SLCO1A2P46721 670 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 NKX3-2P78367 333 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 CNTN2Q02246 1040 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 XRCC4Q13426 336 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 MORF4L2Q15014 288 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 LONRF1Q17RB8 773 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 PAN2Q504Q3 1202 aaKnown RBP8.19□□□□□ -1.1
CXCR4-201ENST00000241393 ZBTB41Q5SVQ8 909 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 PPP1R21Q6ZMI0 780 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 TSHZ1Q6ZSZ6 1077 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 SEPT14Q6ZU15 432 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 PLPPR4Q7Z2D5 763 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 ANKS1BQ7Z6G8 1248 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 LRRC34Q8IZ02 419 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 GBP7Q8N8V2 638 aaPredicted RBP8.19□□□□□ -1.1
CXCR4-201ENST00000241393 CKAP2Q8WWK9 683 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 CFAP57Q96MR6 1250 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 PRMT1Q99873 361 aaKnown RBP8.19□□□□□ -1.1
CXCR4-201ENST00000241393 DDX23Q9BUQ8 820 aaKnown RBP8.19□□□□□ -1.1
CXCR4-201ENST00000241393 LHX5Q9H2C1 402 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 EURLQ9NYK6 297 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 SENP1Q9P0U3 644 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 WDR35Q9P2L0 1181 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 SHOC2Q9UQ13 582 aa8.19□□□□□ -1.1
CXCR4-201ENST00000241393 hCG_1818297A0A087WSY0 165 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TMEM120BA0PK00 339 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 MED7O43513 233 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 SNX3O60493 162 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 PEX10O60683 326 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 IL18RAPO95256 599 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 SLC25A27O95847 323 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 KRT1P04264 644 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 EDN1P05305 212 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 PRKCBP05771 671 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 VIMP08670 466 aaKnown RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 WEE2P0C1S8 567 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 NCAM1P13591 858 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 FAHP16930 419 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 SDHBP21912 280 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 RDXP35241 583 aaKnown RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 MAGEA4P43358 317 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 VCPP55072 806 aaKnown RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 POU5F1BQ06416 359 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TRPC3Q13507 836 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TFDP1Q14186 410 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 LRRC32Q14392 662 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 ACAP1Q15027 740 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 KYNUQ16719 465 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 KCTD19Q17RG1 926 aaPredicted RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 CCDC142Q17RM4 750 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TFDP3Q5H9I0 405 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 UBAP2Q5T6F2 1119 aaKnown RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 DCUN1D2Q6PH85 259 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 VSTM1Q6UX27 236 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 SPOCD1Q6ZMY3 1216 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 ARHGEF18Q6ZSZ5 1173 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 PCGF5Q86SE9 256 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 MIB1Q86YT6 1006 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 ALLCQ8N6M5 410 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 MAGEC3Q8TD91 643 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 DYDC1Q8WWB3 177 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 PRPF31Q8WWY3 499 aaKnown RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 GRAMD1AQ96CP6 724 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 FAM84AQ96KN4 292 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms