RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CCT8L1PA6NM43 557 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 RHOQP17081 205 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 ADRA1DP25100 572 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 PBX3P40426 434 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 CCNFP41002 786 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 DUSP4Q13115 394 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 IKBKEQ14164 716 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 FRG1Q14331 258 aaKnown RBP23.77■■□□□ 1.4
MSX2-201ENST00000239243 ANO4Q32M45 955 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 ARTNQ5T4W7 220 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 DEFB128Q7Z7B8 93 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 FBXO22Q8NEZ5 403 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 CCT6BQ92526 530 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 IL22Q9GZX6 179 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 ACTR5Q9H9F9 607 aaPredicted RBP23.77■■□□□ 1.4
MSX2-201ENST00000239243 MARCH2Q9P0N8 246 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 CDY1Q9Y6F8 540 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 RPS6KL1Q9Y6S9 549 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 MICAL3Q7RTP6 2002 aa23.77■■□□□ 1.4
MSX2-201ENST00000239243 SOAT2O75908 522 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 ANXA9O76027 345 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 KPNA1P52294 538 aaPredicted RBP23.76■■□□□ 1.39
MSX2-201ENST00000239243 MGAT5Q09328 741 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 CDH17Q12864 832 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 C10orf120Q5SQS8 335 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 TIFABQ6ZNK6 161 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 CDK5RAP1Q96SZ6 601 aaKnown RBP23.76■■□□□ 1.39
MSX2-201ENST00000239243 ZYG11BQ9C0D3 744 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 CRISPLD1Q9H336 500 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 MTRRQ9UBK8 725 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 UGT1A9O60656 530 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 VNN2O95498 520 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 NDST2P52849 883 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 TLE2Q04725 743 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 RING1Q06587 406 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 MS4A13Q5J8X5 152 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 C1orf53Q5VUE5 145 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 SLC8B1Q6J4K2 584 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 CNKSR3Q6P9H4 555 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 C14orf80Q86SX3 495 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 CNTD1Q8N815 330 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 FCRL5Q96RD9 977 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 UGT1A7Q9HAW7 530 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 UGT1A10Q9HAW8 530 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 UGT1A8Q9HAW9 530 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 PHTF1Q9UMS5 762 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 BACE2Q9Y5Z0 518 aa23.76■■□□□ 1.39
MSX2-201ENST00000239243 USP1O94782 785 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 MAGEA9P43362 315 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 LACTB2Q53H82 288 aaPredicted RBP23.75■■□□□ 1.39
MSX2-201ENST00000239243 TAS1R1Q7RTX1 841 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 TMEM135Q86UB9 458 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 CHSY1Q86X52 802 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 UMODL1-AS1Q8N2C9 162 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 BCL7CQ8WUZ0 217 aaPredicted RBP23.75■■□□□ 1.39
MSX2-201ENST00000239243 ZNF75CPQ92670 426 aaPredicted RBP23.75■■□□□ 1.39
MSX2-201ENST00000239243 CERS2Q96G23 380 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 PRDM5Q9NQX1 630 aaPredicted RBP23.75■■□□□ 1.39
MSX2-201ENST00000239243 MPP6Q9NZW5 540 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 ZFATQ9P243 1243 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 TXNDC16Q9P2K2 825 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 SLC17A7Q9P2U7 560 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 GREB1Q4ZG55 1949 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 USP12O75317 370 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 RFPL1O75677 317 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 ZDHHC11BP0C7U3 371 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 DHRS4L1P0CG22 281 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 TUFMP49411 452 aaKnown RBP23.75■■□□□ 1.39
MSX2-201ENST00000239243 TRIM60Q495X7 471 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 PRSS55Q6UWB4 352 aaPredicted RBP23.75■■□□□ 1.39
MSX2-201ENST00000239243 ARHGAP36Q6ZRI8 547 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 FAM47EQ6ZV65 393 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 TRPM8Q7Z2W7 1104 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 SRPK1Q96SB4 655 aaKnown RBP23.75■■□□□ 1.39
MSX2-201ENST00000239243 TTLL2Q9BWV7 592 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 UBE2OQ9C0C9 1292 aaKnown RBP23.75■■□□□ 1.39
MSX2-201ENST00000239243 TMEM248Q9NWD8 314 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 KLHL14Q9P2G3 628 aa23.75■■□□□ 1.39
MSX2-201ENST00000239243 IGLV3-10A0A075B6K4 115 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 FAM237BA0A1B0GVD1 139 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 EDF1O60869 148 aaKnown RBP23.74■■□□□ 1.39
MSX2-201ENST00000239243 NEBLO76041 1014 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 EFEMP2O95967 443 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 ETV4P43268 484 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 PSMD5Q16401 504 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 ZNF683Q8IZ20 524 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.74■■□□□ 1.39
MSX2-201ENST00000239243 USP33Q8TEY7 942 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 FATE1Q969F0 183 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 GLOD4Q9HC38 313 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 NDFIP2Q9NV92 336 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 SLC38A8A6NNN8 435 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 UPP2O95045 317 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 IGLV3-27P01718 113 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 BMPR2Q13873 1038 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 RASIP1Q5U651 963 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 PACS1Q6VY07 963 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 RASSF3Q86WH2 238 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 MIB1Q86YT6 1006 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 ACMSDQ8TDX5 336 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms