RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 STAT4Q14765 748 aa15.57■□□□□ 0.08
HDHD3-201ENST00000238379 SHHQ15465 462 aa15.57■□□□□ 0.08
HDHD3-201ENST00000238379 LONRF1Q17RB8 773 aa15.57■□□□□ 0.08
HDHD3-201ENST00000238379 C6orf118Q5T5N4 469 aa15.57■□□□□ 0.08
HDHD3-201ENST00000238379 ARL14EPQ8N8R7 260 aaPredicted RBP15.57■□□□□ 0.08
HDHD3-201ENST00000238379 ATP11CQ8NB49 1132 aa15.57■□□□□ 0.08
HDHD3-201ENST00000238379 ADAMTS19Q8TE59 1207 aa15.57■□□□□ 0.08
HDHD3-201ENST00000238379 HMCESQ96FZ2 354 aa15.57■□□□□ 0.08
HDHD3-201ENST00000238379 VPS37BQ9H9H4 285 aa15.57■□□□□ 0.08
HDHD3-201ENST00000238379 XAB2Q9HCS7 855 aaKnown RBP15.57■□□□□ 0.08
HDHD3-201ENST00000238379 BCCIPQ9P287 314 aaKnown RBP eCLIP15.57■□□□□ 0.08
HDHD3-201ENST00000238379 AGO1Q9UL18 857 aaKnown RBP15.57■□□□□ 0.08
HDHD3-201ENST00000238379 CHMP2BQ9UQN3 213 aa15.57■□□□□ 0.08
HDHD3-201ENST00000238379 CHD7Q9P2D1 2997 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 OBSL1O75147 1896 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 NYNRINQ9P2P1 1898 aaKnown RBP15.56■□□□□ 0.08
HDHD3-201ENST00000238379 SMIM23A6NLE4 172 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 RASA4BC9J798 803 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 NRG2O14511 850 aaPredicted RBP15.56■□□□□ 0.08
HDHD3-201ENST00000238379 RASA4O43374 803 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 CACNG3O60359 315 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 PEX11BO96011 259 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 IRF1P10914 325 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 TSHRP16473 764 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 NFKB1P19838 968 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 SSTR1P30872 391 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 SLCO1A2P46721 670 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 MAPKAPK2P49137 400 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 SMAD3P84022 425 aaKnown RBP15.56■□□□□ 0.08
HDHD3-201ENST00000238379 ZXDBP98169 803 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 CYP4F8P98187 520 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 ADGRF1Q5T601 910 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 ITPRIPL1Q6GPH6 555 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 TIGD7Q6NT04 549 aaPredicted RBP15.56■□□□□ 0.08
HDHD3-201ENST00000238379 CFAP52Q8N1V2 620 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 MRPS31Q92665 395 aaKnown RBP15.56■□□□□ 0.08
HDHD3-201ENST00000238379 FATE1Q969F0 183 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 PRICKLE1Q96MT3 831 aaPredicted RBP15.56■□□□□ 0.08
HDHD3-201ENST00000238379 RETREG1Q9H6L5 497 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 RSPH14Q9UHP6 348 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 STOML2Q9UJZ1 356 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 ADAM21Q9UKJ8 722 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 MYO7AQ13402 2215 aa15.56■□□□□ 0.08
HDHD3-201ENST00000238379 ARHGAP42A6NI28 874 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 H3BNC9 293 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 CCL16O15467 120 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 GREM1O60565 184 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 C1RP00736 705 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 MLNP12872 115 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 OR1E1P30953 314 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 MAGEA10P43363 369 aaPredicted RBP15.55■□□□□ 0.08
HDHD3-201ENST00000238379 LMAN1P49257 510 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 YBEYP58557 167 aaPredicted RBP15.55■□□□□ 0.08
HDHD3-201ENST00000238379 SARNPP82979 210 aaKnown RBP15.55■□□□□ 0.08
HDHD3-201ENST00000238379 TNFAIP8L3Q5GJ75 292 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 PPM1LQ5SGD2 360 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 KCTD11Q693B1 232 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 CAPN12Q6ZSI9 719 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 C3orf62Q6ZUJ4 267 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 RTL10Q7L3V2 364 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 PALM2Q8IXS6 379 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 KLHDC8BQ8IXV7 354 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 ELMOD1Q8N336 334 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 FAM76AQ8TAV0 307 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 MAML1Q92585 1016 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 TLCD1Q96CP7 247 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 LRRC39Q96DD0 335 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 SIGLEC10Q96LC7 697 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 CCDC77Q9BR77 488 aa15.55■□□□□ 0.08
HDHD3-201ENST00000238379 NOVA2Q9UNW9 492 aaKnown RBP15.55■□□□□ 0.08
HDHD3-201ENST00000238379 ZFP37Q9Y6Q3 630 aaPredicted RBP15.55■□□□□ 0.08
HDHD3-201ENST00000238379 LPXNO60711 386 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 RAMP2O60895 175 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 RPS24P62847 133 aaKnown RBP15.54■□□□□ 0.08
HDHD3-201ENST00000238379 PARP15Q460N3 678 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 DNAJC21Q5F1R6 531 aaKnown RBP15.54■□□□□ 0.08
HDHD3-201ENST00000238379 RABGAP1LQ5R372 815 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 LRRC8BQ6P9F7 803 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 USP33Q8TEY7 942 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 TGS1Q96RS0 853 aaKnown RBP15.54■□□□□ 0.08
HDHD3-201ENST00000238379 CORO1BQ9BR76 489 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 MLPHQ9BV36 600 aaPredicted RBP15.54■□□□□ 0.08
HDHD3-201ENST00000238379 CPQQ9Y646 472 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 CEP290O15078 2479 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 MTCL1Q9Y4B5 1905 aaKnown RBP15.54■□□□□ 0.08
HDHD3-201ENST00000238379 A0A1W2PRU2 124 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 J3KR12 359 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 TRDMT1O14717 391 aaKnown RBP15.54■□□□□ 0.08
HDHD3-201ENST00000238379 RGS16O15492 202 aaPredicted RBP15.54■□□□□ 0.08
HDHD3-201ENST00000238379 CLASP2O75122 1294 aaKnown RBP15.54■□□□□ 0.08
HDHD3-201ENST00000238379 RFPL2O75678 378 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 SUN1O94901 812 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 AP2A1O95782 977 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 LATS1O95835 1130 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 IVLP07476 585 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 CDC25CP30307 473 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 PHBP35232 272 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 CDH4P55283 916 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 ERVK-21P61565 698 aa15.54■□□□□ 0.08
HDHD3-201ENST00000238379 POLD3Q15054 466 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms