RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 OXSMQ9NWU1 459 aa15.83■□□□□ 0.13
DDX55-201ENST00000238146 CHCHD3Q9NX63 227 aaKnown RBP15.83■□□□□ 0.13
DDX55-201ENST00000238146 A0A0J9YVX5 310 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 PFDN1O60925 122 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 BCAS2O75934 225 aaPredicted RBP15.83■□□□□ 0.12
DDX55-201ENST00000238146 SCNN1BP51168 640 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 TMEM198Q66K66 360 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 SEL1L3Q68CR1 1132 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 PDCD6IPQ8WUM4 868 aaKnown RBP15.83■□□□□ 0.12
DDX55-201ENST00000238146 SREK1Q8WXA9 508 aaKnown RBP15.83■□□□□ 0.12
DDX55-201ENST00000238146 DLG3Q92796 817 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 AGAP3Q96P47 875 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 MAF1Q9H063 256 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 PRDM16Q9HAZ2 1276 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 HOXC10Q9NYD6 342 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 SEPT10Q9P0V9 454 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 RAP2CQ9Y3L5 183 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 HES2Q9Y543 173 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 CEPT1Q9Y6K0 416 aa15.83■□□□□ 0.12
DDX55-201ENST00000238146 NOP56O00567 594 aaKnown RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 ACOT8O14734 319 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 GRID2O43424 1007 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 TRPA1O75762 1119 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 APBA3O96018 575 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 MPOP05164 745 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 SETSIPP0DME0 302 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 CDH2P19022 906 aaPredicted RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 EDNRBP24530 442 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 PPARGP37231 505 aaPredicted RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 RPL14P50914 215 aaKnown RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 EMP3P54852 163 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 RBP5P82980 135 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 SOWAHAQ2M3V2 549 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 EFCAB12Q6NXP0 572 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 EXOC8Q8IYI6 725 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 TTC39CQ8N584 583 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 CHST13Q8NET6 341 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 SLC7A14Q8TBB6 771 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 URGCPQ8TCY9 931 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 ZNF669Q96BR6 464 aaPredicted RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 CATSPER2Q96P56 530 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 WRNIP1Q96S55 665 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 GPR20Q99678 358 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 MRPL45Q9BRJ2 306 aaKnown RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 NUF2Q9BZD4 464 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 DPP3Q9NY33 737 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 PADI4Q9UM07 663 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 NME7Q9Y5B8 376 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 SNX9Q9Y5X1 595 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 AK5Q9Y6K8 562 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 SOWAHBA6NEL2 793 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 H2AFYO75367 372 aaKnown RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 TRMUO75648 421 aaKnown RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 RNASEH2AO75792 299 aaKnown RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 ARIH2O95376 493 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 MCF2P10911 925 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 TFEBP19484 476 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 PPP2R5DQ14738 602 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 PDK1Q15118 436 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 SETD3Q86TU7 594 aaPredicted RBP15.82■□□□□ 0.12
DDX55-201ENST00000238146 ZDHHC17Q8IUH5 632 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 ZNF567Q8N184 647 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 ACVR1CQ8NER5 493 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 OR52K1Q8NGK4 314 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 LPIN3Q9BQK8 851 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 DRC3Q9H069 523 aa15.82■□□□□ 0.12
DDX55-201ENST00000238146 C19orf81C9J6K1 198 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 SLC22A2O15244 555 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 CCDC166P0CW27 439 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 TGFB3P10600 412 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 ZNF26P17031 533 aaPredicted RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 ARL4AP40617 200 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 ARL13AQ5H913 290 aaPredicted RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 SLC26A9Q7LBE3 791 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.81■□□□□ 0.12
DDX55-201ENST00000238146 CPB2Q96IY4 423 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 LRRC40Q9H9A6 602 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 PRMT7Q9NVM4 692 aaPredicted RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 RHBDL2Q9NX52 303 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 ZCWPW2A0A1B0GU75 182 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 USP12O75317 370 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 PIGNO95427 931 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 GLUD2P49448 558 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 TNFAIP2Q03169 654 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 CCNYQ8ND76 341 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 FAM156AQ8NDB6 213 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 NLRP7Q8WX94 980 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 LZICQ8WZA0 190 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 FAM124BQ9H5Z6 455 aaPredicted RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 ZDHHC2Q9UIJ5 367 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 TK2O00142 265 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 STAU1O95793 577 aaKnown RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 JUNP05412 331 aaKnown RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 ADSLP30566 484 aaPredicted RBP15.81■□□□□ 0.12
DDX55-201ENST00000238146 GRIA4P48058 902 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 ART3Q13508 389 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 ADRM1Q16186 407 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 AMHR2Q16671 573 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 TMEM135Q86UB9 458 aa15.81■□□□□ 0.12
DDX55-201ENST00000238146 FAM131BQ86XD5 332 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms