RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TOMM70O94826 608 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 P4HBP07237 508 aaKnown RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 CYP2D6P10635 497 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 MBL2P11226 248 aaPredicted RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 BMP4P12644 408 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 PIK3R1P27986 724 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 AGAP9Q5VTM2 703 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 FAM122CQ6P4D5 195 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 TFAP2DQ7Z6R9 452 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 YTHDF1Q9BYJ9 559 aaKnown RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 MUC3BQ9H195 1237 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 COPG2Q9UBF2 871 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 PTPRFP10586 1907 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 TCRBV7S3A2A0A539 114 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 STX16-NPEPL1H3BU86 382 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 SGK1O00141 431 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 MAN1A2O60476 641 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 BCAS1O75363 584 aaPredicted RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 CCNKO75909 580 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 ELK3P41970 407 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 CACNB3P54284 484 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 MLLT6P55198 1093 aaPredicted RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 NLRP11P59045 1033 aaKnown RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 COG2Q14746 738 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 WDR78Q5VTH9 848 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 POTEGQ6S5H5 508 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 ABRAXAS1Q6UWZ7 409 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 CATSPER3Q86XQ3 398 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 CTAGE3PQ8IX95 158 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 LINC00469Q8N7U9 141 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 HTRA1Q92743 480 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 TARS2Q9BW92 718 aaKnown RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 WDR41Q9HAD4 459 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 PKD2L2Q9NZM6 624 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 POLHQ9Y253 713 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 C9IYK1 514 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 KBTBD13C9JR72 458 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 PHGDHO43175 533 aaKnown RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 TMEM63AO94886 807 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 BMP2P12643 396 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 CYP11B1P15538 503 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 CCND2P30279 289 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 OR3A3P47888 321 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 PSMC6P62333 389 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 BFSP1Q12934 665 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 MAPK11Q15759 364 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 PTAR1Q7Z6K3 402 aaPredicted RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 LURAP1LQ8IV03 231 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 ADGRF2Q8IZF7 708 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 FAM109AQ8N4B1 249 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 RP9Q8TA86 221 aaKnown RBP13.26□□□□□ -0.29
MSH2-201ENST00000233146 GRPEL2Q8TAA5 225 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 FKBP10Q96AY3 582 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 CFAP36Q96G28 342 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 CNDP1Q96KN2 507 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 BTN2A3PQ96KV6 586 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 MBOAT7Q96N66 472 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 TMEM246Q9BRR3 403 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 PNPLA8Q9NP80 782 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 MTMR7Q9Y216 660 aa13.26□□□□□ -0.29
MSH2-201ENST00000233146 TOGARAM1Q9Y4F4 1720 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 KAT6AQ92794 2004 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 MARCH6O60337 910 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 MFN2O95140 757 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 CAPN1P07384 714 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 RALBP11234 206 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 GLDCP23378 1020 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 SLC7A1P30825 629 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 SERPINB5P36952 375 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 SLC13A2Q13183 592 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 CHST15Q7LFX5 561 aaPredicted RBP13.25□□□□□ -0.29
MSH2-201ENST00000233146 KCTD20Q7Z5Y7 419 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 NDUFAF2Q8N183 169 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 TGFBRAP1Q8WUH2 860 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 JPH3Q8WXH2 748 aaPredicted RBP13.25□□□□□ -0.29
MSH2-201ENST00000233146 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 ASB9Q96DX5 294 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 BEGAINQ9BUH8 593 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 SLA2Q9H6Q3 261 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 DCP1AQ9NPI6 582 aaPredicted RBP13.25□□□□□ -0.29
MSH2-201ENST00000233146 OR5K3A6NET4 321 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 TRIM38O00635 465 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 AKR1B1P15121 316 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 PROZP22891 400 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 CFL1P23528 166 aaKnown RBP13.25□□□□□ -0.29
MSH2-201ENST00000233146 DSTNP60981 165 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 MMRN1Q13201 1228 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 RFTN1Q14699 578 aaPredicted RBP13.25□□□□□ -0.29
MSH2-201ENST00000233146 LGSNQ5TDP6 509 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 ZNF773Q6PK81 442 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 EPGNQ6UW88 154 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 PPM1NQ8N819 430 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 FAM156AQ8NDB6 213 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 DDX1Q92499 740 aaKnown RBP13.25□□□□□ -0.29
MSH2-201ENST00000233146 DDX17Q92841 729 aaKnown RBP13.25□□□□□ -0.29
MSH2-201ENST00000233146 RCN3Q96D15 328 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 UQCC2Q9BRT2 126 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 LHPPQ9H008 270 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 NARFLQ9H6Q4 476 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 BCS1LQ9Y276 419 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms