RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 EHD1Q9H4M9 534 aa14.45□□□□□ -0.1
PCDHB3-201ENST00000231130 C20orf96Q9NUD7 363 aaPredicted RBP14.45□□□□□ -0.1
PCDHB3-201ENST00000231130 ITGA11Q9UKX5 1188 aa14.45□□□□□ -0.1
PCDHB3-201ENST00000231130 TRDMT1O14717 391 aaKnown RBP14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 AP1G1O43747 822 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 CYP2C9P11712 490 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 PTPN11Q06124 597 aaPredicted RBP14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 ART3Q13508 389 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 OGFRL1Q5TC84 451 aaPredicted RBP14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 PRAMEF18Q5VWM3 479 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 HEATR6Q6AI08 1181 aaKnown RBP14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 PGM2L1Q6PCE3 622 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 LAYNQ6UX15 382 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 FAM183BPQ6ZVS7 135 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 KBTBD6Q86V97 674 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 PKP2Q99959 881 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 APOL2Q9BQE5 337 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 GCOM2Q9BZD3 368 aaPredicted RBP14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 HES2Q9Y543 173 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 SIPA1L1O43166 1804 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 GLRA3O75311 464 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 NAMPTP43490 491 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 MS4A2Q01362 244 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 ARCQ7LC44 396 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 PCDH20Q8N6Y1 951 aaKnown RBP14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 TRAPPC12Q8WVT3 735 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 TAMM41Q96BW9 452 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 SNRNP25Q9BV90 132 aaKnown RBP14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 SIAEQ9HAT2 523 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 TCF7L2Q9NQB0 619 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 PDLIM7Q9NR12 457 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 GIN1Q9NXP7 522 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 GPRC5DQ9NZD1 345 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 NOX1Q9Y5S8 564 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 CROCCQ5TZA2 2017 aa14.44□□□□□ -0.1
PCDHB3-201ENST00000231130 CFAP99D6REC4 459 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 GSRP00390 522 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 P4HA1P13674 534 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 ZNF12P17014 697 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 IRF9Q00978 393 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 NANOGP8Q6NSW7 305 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 CYP2R1Q6VVX0 501 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 NAPRTQ6XQN6 538 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 WDR49Q8IV35 697 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 KIAA2013Q8IYS2 634 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 ELOVL4Q9GZR5 314 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 C6orf203Q9P0P8 240 aaPredicted RBP14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 COPG2Q9UBF2 871 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 BCAP29Q9UHQ4 241 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 ATP11BQ9Y2G3 1177 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 CYP2F1P24903 491 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 MPSTP25325 297 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 SLC10A2Q12908 348 aaPredicted RBP14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 STILQ15468 1287 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 FSCBQ5H9T9 825 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 ABHD15Q6UXT9 468 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 DSELQ8IZU8 1212 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 SPATA6LQ8N4H0 392 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 TDRD5Q8NAT2 981 aaKnown RBP14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 CATSPER1Q8NEC5 780 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 NSUN6Q8TEA1 469 aaKnown RBP14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 SCYL1Q96KG9 808 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 NPAS2Q99743 824 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 LPIN3Q9BQK8 851 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 PLK2Q9NYY3 685 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 FAM159BA6NKW6 160 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 PABPC1P11940 636 aaKnown RBP14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 TSHRP16473 764 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 ZNF23P17027 643 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 MAP4P27816 1152 aaKnown RBP14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 AVPR1AP37288 418 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 ARL1P40616 181 aaPredicted RBP14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 SERPINB9P50453 376 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 NME3Q13232 169 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 FAM47CQ5HY64 1035 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 EEF1DP3Q658K8 133 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 LILRA2Q8N149 483 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 CNPY3Q9BT09 278 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 GBA3Q9H227 469 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 HESX1Q9UBX0 185 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 PCDHA11Q9Y5I1 949 aa14.43□□□□□ -0.1
PCDHB3-201ENST00000231130 TRIM64CA6NLI5 447 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 MT-CO1P00395 513 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 IL1BP01584 269 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 LTFP02788 710 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ALDH2P05091 517 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 PRKCBP05771 671 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SUPT20HL2P0C7V6 817 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 PTPN1P18031 435 aaKnown RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SDC4P31431 198 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ZNF143P52747 638 aaPredicted RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ZNF829Q3KNS6 432 aaPredicted RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SUPT20HL1Q3ZLR7 823 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 BNC2Q6ZN30 1099 aaPredicted RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 CCNYL1Q8N7R7 359 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ISOC1Q96CN7 298 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SGF29Q96ES7 293 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 FRMD8P1Q9BZ68 369 aaPredicted RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 CCDC68Q9H2F9 335 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms