RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PCLAFQ15004 111 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 LRRC39Q96DD0 335 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 KIF12Q96FN5 646 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 CSPG4P5Q96PW8 444 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 PRMT7Q9NVM4 692 aaPredicted RBP9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 SAGE1Q9NXZ1 904 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 TMEM216Q9P0N5 145 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 CIDEBQ9UHD4 219 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 A0A1B0GTW7 788 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 HTR3EA5X5Y0 456 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 TMEM221A6NGB7 291 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 CITO14578 2027 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 MDM4O15151 490 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 BIRC5O15392 142 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 STRNO43815 780 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 SIN3BO75182 1162 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 MCF2P10911 925 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 ABCG1P45844 678 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 STILQ15468 1287 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 NRF1Q16656 503 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 GLRA4Q5JXX5 417 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 NCBP2-AS2Q69YL0 99 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 HEATR6Q6AI08 1181 aaKnown RBP9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 PACS1Q6VY07 963 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 HPS6Q86YV9 775 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 WDR75Q8IWA0 830 aaKnown RBP9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 PPP4R1Q8TF05 950 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 PPP1R13LQ8WUF5 828 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 ARNTL2Q8WYA1 636 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 SORT1Q99523 831 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 SLC4A5Q9BY07 1137 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 ASB7Q9H672 318 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 XPNPEP3Q9NQH7 507 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 MAN1C1Q9NR34 630 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 SOX13Q9UN79 622 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 AP4E1Q9UPM8 1137 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 DPYSL4O14531 572 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 HBP1O60381 514 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 PLIN3O60664 434 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 ERVK-10P10266 1014 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 TPSB2P20231 275 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 SLC5A3P53794 718 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 PITX1P78337 314 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 RBP5P82980 135 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 TPSAB1Q15661 275 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 KRT80Q6KB66 452 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 FBXL19Q6PCT2 694 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 PTAR1Q7Z6K3 402 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 CMC1Q7Z7K0 106 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 FAM131BQ86XD5 332 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 CDKL3Q8IVW4 592 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 TNS4Q8IZW8 715 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 SMYD1Q8NB12 490 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 SMARCAD1Q9H4L7 1026 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 S100A14Q9HCY8 104 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 NDUFA13Q9P0J0 144 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 MAGED2Q9UNF1 606 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 HES2Q9Y543 173 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 SYNJ2BP-COX16A0A087WUM0 186 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 BUD23O43709 281 aaKnown RBP9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 KDM1AO60341 852 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 CNMDO75829 334 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 DGKIO75912 1065 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 ZBTB7AO95365 584 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 S100BP04271 92 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 TFAP2AP05549 437 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 CCDC130P13994 396 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 AOC1P19801 751 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 ADORA2BP29275 332 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 SLC5A2P31639 672 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 SEMA5AQ13591 1074 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 BTG3Q14201 252 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 DPYSL2Q16555 572 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 DNAL1Q4LDG9 190 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 OGFOD2Q6N063 350 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 PDSS2Q86YH6 399 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 CLVS1Q8IUQ0 354 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 DEFB107AQ8IZN7 70 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 COLGALT1Q8NBJ5 622 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 HTR3CQ8WXA8 447 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 NCSTNQ92542 709 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 TMIGD2Q96BF3 282 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 TBCBQ99426 244 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 TBC1D23Q9NUY8 699 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 COX16Q9P0S2 106 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 GINS2Q9Y248 185 aa9.6□□□□□ -0.87
HLA-DOA-201ENST00000229829 J3QRK9 145 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 FBP2O00757 339 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 USP12O75317 370 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 CRABP2P29373 138 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 PCYT1AP49585 367 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 IDH3AP50213 366 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 SERPINB9P50453 376 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 PGGT1BP53609 377 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 MRPS22P82650 360 aaKnown RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 NIPAL4Q0D2K0 466 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 TLR1Q15399 786 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 TIFABQ6ZNK6 161 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 ARCQ7LC44 396 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 PLD6Q8N2A8 252 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms