RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 TRIM16LQ309B1 348 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 YTHDF3Q7Z739 585 aaKnown RBP16.43■□□□□ 0.22
HDAC5-201ENST00000225983 DDHD1Q8NEL9 900 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 SENP6Q9GZR1 1112 aaPredicted RBP16.43■□□□□ 0.22
HDAC5-201ENST00000225983 PRDM12Q9H4Q4 367 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 ZNF112Q9UJU3 913 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 YDJCA8MPS7 323 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 RAD51BO15315 384 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 KRT6AP02538 564 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 KRT6BP04259 564 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 IMPDH2P12268 514 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 KRT6CP48668 564 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 PCID2Q5JVF3 399 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 RNF43Q68DV7 783 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 FAM9CQ8IZT9 166 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 OR56A4Q8NGH8 313 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 BTN2A2Q8WVV5 523 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 TINF2Q9BSI4 451 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 ROGDIQ9GZN7 287 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 SALL4Q9UJQ4 1053 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 PQBP1O60828 265 aaKnown RBP16.43■□□□□ 0.22
HDAC5-201ENST00000225983 CCNE2O96020 404 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 ZNF7P17097 686 aaPredicted RBP16.43■□□□□ 0.22
HDAC5-201ENST00000225983 CD86P42081 329 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 IL5RAQ01344 420 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 FAM126BQ8IXS8 530 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 VPS33AQ96AX1 596 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 RNF145Q96MT1 663 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 CDK5RAP1Q96SZ6 601 aaKnown RBP16.43■□□□□ 0.22
HDAC5-201ENST00000225983 PALMDQ9NP74 551 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 CLDN5O00501 218 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 CKBP12277 381 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 PPP1R26Q5T8A7 1209 aaPredicted RBP16.43■□□□□ 0.22
HDAC5-201ENST00000225983 PHF21AQ96BD5 680 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 UBA2Q9UBT2 640 aaPredicted RBP16.43■□□□□ 0.22
HDAC5-201ENST00000225983 COG5Q9UP83 839 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 SLIT3O75094 1523 aa16.43■□□□□ 0.22
HDAC5-201ENST00000225983 NRCAMQ92823 1304 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 A0A087X1B8 175 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 CXCL17Q6UXB2 119 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 MILR1Q7Z6M3 343 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 TRIM69Q86WT6 500 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 TRIM48Q8IWZ4 208 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 LPPQ93052 612 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 TBC1D10AQ9BXI6 508 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 MMADHCQ9H3L0 296 aaPredicted RBP16.42■□□□□ 0.22
HDAC5-201ENST00000225983 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 MRC1P22897 1456 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 SCAMP3O14828 347 aaKnown RBP16.42■□□□□ 0.22
HDAC5-201ENST00000225983 ERBB2P04626 1255 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 FGFR3P22607 806 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 RRM2P31350 389 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 UBAP2LQ14157 1087 aaKnown RBP16.42■□□□□ 0.22
HDAC5-201ENST00000225983 QPCTQ16769 361 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 FAM98BQ52LJ0 330 aaKnown RBP16.42■□□□□ 0.22
HDAC5-201ENST00000225983 ANKRD52Q8NB46 1076 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 BHLHE22Q8NFJ8 381 aaPredicted RBP16.42■□□□□ 0.22
HDAC5-201ENST00000225983 RRAGCQ9HB90 399 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 SH3BP4Q9P0V3 963 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 TUBGCP4Q9UGJ1 667 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 PRDM4Q9UKN5 801 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 R3HDM2Q9Y2K5 976 aaKnown RBP16.42■□□□□ 0.22
HDAC5-201ENST00000225983 TCRBV7S2A1N4TA0A589 114 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 ATP4AP20648 1035 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 ERAP2Q6P179 960 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 PALB2Q86YC2 1186 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 BSNDQ8WZ55 320 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 NDNQ99608 321 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 OMDQ99983 421 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 HGH1Q9BTY7 390 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 POLR1EQ9GZS1 481 aaKnown RBP16.42■□□□□ 0.22
HDAC5-201ENST00000225983 ACSS3Q9H6R3 686 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 MARCH2Q9P0N8 246 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 TMCC3Q9ULS5 477 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 PADI4Q9UM07 663 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 TMEM114B3SHH9 223 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 ENTPD5O75356 428 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 SH3BGRLO75368 114 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 RASSF9O75901 435 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 DLGAP3O95886 979 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 PFKFB4Q16877 469 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 RAP1GAP2Q684P5 730 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 PLPPR4Q7Z2D5 763 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 RASGEF1CQ8N431 466 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 SPATA6LQ8N4H0 392 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 EFCAB3Q8N7B9 438 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 HSFY1Q96LI6 401 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 OSGEPL1Q9H4B0 414 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 RNPEPL1Q9HAU8 725 aa16.42■□□□□ 0.22
HDAC5-201ENST00000225983 LINC00854A0A1B0GVQ3 168 aa16.41■□□□□ 0.22
HDAC5-201ENST00000225983 GSSP48637 474 aa16.41■□□□□ 0.22
HDAC5-201ENST00000225983 ARMC6Q6NXE6 501 aa16.41■□□□□ 0.22
HDAC5-201ENST00000225983 MSL3Q8N5Y2 521 aaKnown RBP16.41■□□□□ 0.22
HDAC5-201ENST00000225983 ZNF513Q8N8E2 541 aaPredicted RBP16.41■□□□□ 0.22
HDAC5-201ENST00000225983 MECRQ9BV79 373 aa16.41■□□□□ 0.22
HDAC5-201ENST00000225983 WDR41Q9HAD4 459 aa16.41■□□□□ 0.22
HDAC5-201ENST00000225983 MAN1C1Q9NR34 630 aa16.41■□□□□ 0.22
HDAC5-201ENST00000225983 TCRBV9S1A1TA0A576 114 aa16.41■□□□□ 0.22
HDAC5-201ENST00000225983 EFCAB14O75071 495 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms