RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ZNF776Q68DI1 518 aaPredicted RBP18.56■□□□□ 0.56
PFN1-201ENST00000225655 DNAJC24Q6P3W2 148 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 ALKBH5Q6P6C2 394 aaKnown RBP18.56■□□□□ 0.56
PFN1-201ENST00000225655 OLFML1Q6UWY5 402 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 MON1BQ7L1V2 547 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 SLC26A9Q7LBE3 791 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 XYLT1Q86Y38 959 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 CCDC170Q8IYT3 715 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 LGI2Q8N0V4 545 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 C1orf216Q8TAB5 229 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 MRGPRX3Q96LB0 322 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 SLC2A13Q96QE2 648 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 BAG1Q99933 345 aaPredicted RBP18.56■□□□□ 0.56
PFN1-201ENST00000225655 SELENOOQ9BVL4 669 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 RSPH9Q9H1X1 276 aaPredicted RBP18.56■□□□□ 0.56
PFN1-201ENST00000225655 TMEM51Q9NW97 253 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.56■□□□□ 0.56
PFN1-201ENST00000225655 KIAA1522Q9P206 1035 aaPredicted RBP18.56■□□□□ 0.56
PFN1-201ENST00000225655 TJP2Q9UDY2 1190 aa18.56■□□□□ 0.56
PFN1-201ENST00000225655 EIF2B4Q9UI10 523 aaKnown RBP18.56■□□□□ 0.56
PFN1-201ENST00000225655 SPAARA0A1B0GVQ0 90 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 KCNU1A8MYU2 1149 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 H0Y626 953 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 SLC2A3P11169 496 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 PITX1P78337 314 aaPredicted RBP18.55■□□□□ 0.56
PFN1-201ENST00000225655 SIM1P81133 766 aaPredicted RBP18.55■□□□□ 0.56
PFN1-201ENST00000225655 SPA17Q15506 151 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 HNRNPA1L2Q32P51 320 aaKnown RBP18.55■□□□□ 0.56
PFN1-201ENST00000225655 RAP1GAP2Q684P5 730 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 CHSY1Q86X52 802 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 MCOLN2Q8IZK6 566 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 ATP6V0D2Q8N8Y2 350 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 BTBD1Q9H0C5 482 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 C6orf106Q9H6K1 298 aaPredicted RBP18.55■□□□□ 0.56
PFN1-201ENST00000225655 FAM204AQ9H8W3 233 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 RRN3Q9NYV6 651 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 SLC12A6Q9UHW9 1150 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 STAP1Q9ULZ2 295 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 ERVW-1Q9UQF0 538 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.55■□□□□ 0.56
PFN1-201ENST00000225655 SCINQ9Y6U3 715 aa18.55■□□□□ 0.56
PFN1-201ENST00000225655 A0A087X0T9 212 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 FAM170AA1A519 330 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 F5H5T6 163 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 DAB1O75553 588 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 KRT37O76014 449 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 MOCS3O95396 460 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 SEMA4FO95754 770 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 SRPRAP08240 638 aaKnown RBP18.54■□□□□ 0.56
PFN1-201ENST00000225655 FAM228BP0C875 321 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 GSCP56915 257 aaPredicted RBP18.54■□□□□ 0.56
PFN1-201ENST00000225655 USP30Q70CQ3 517 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 DEFB106AQ8N104 65 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 C3orf20Q8ND61 904 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 CCDC112Q8NEF3 446 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 ZNF653Q96CK0 615 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 CHP1Q99653 195 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 PRMT1Q99873 361 aaKnown RBP18.54■□□□□ 0.56
PFN1-201ENST00000225655 ISCUQ9H1K1 167 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 MTG2Q9H4K7 406 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 SGK2Q9HBY8 427 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 MRPL47Q9HD33 250 aaKnown RBP18.54■□□□□ 0.56
PFN1-201ENST00000225655 PARVAQ9NVD7 372 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 DDIT4Q9NX09 232 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 SCML1Q9UN30 329 aa18.54■□□□□ 0.56
PFN1-201ENST00000225655 NYNRINQ9P2P1 1898 aaKnown RBP18.54■□□□□ 0.56
PFN1-201ENST00000225655 TOP3BO95985 862 aaKnown RBP18.53■□□□□ 0.56
PFN1-201ENST00000225655 PTMAP06454 111 aaKnown RBP18.53■□□□□ 0.56
PFN1-201ENST00000225655 PROS1P07225 676 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 KRT3P12035 628 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 ABCB4P21439 1286 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 CCR1P32246 355 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 AFF3P51826 1226 aaKnown RBP18.53■□□□□ 0.56
PFN1-201ENST00000225655 RNASE9P60153 205 aaKnown RBP18.53■□□□□ 0.56
PFN1-201ENST00000225655 MTA1Q13330 715 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 SLC12A1Q13621 1099 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 C9orf64Q5T6V5 341 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 TTC39BQ5VTQ0 682 aaPredicted RBP18.53■□□□□ 0.56
PFN1-201ENST00000225655 DCUN1D2Q6PH85 259 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 IL27RAQ6UWB1 636 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 ARCQ7LC44 396 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 TXLNBQ8N3L3 684 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 CTNNBL1Q8WYA6 563 aaPredicted RBP18.53■□□□□ 0.56
PFN1-201ENST00000225655 SNX19Q92543 992 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 SCNM1Q9BWG6 230 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 ADAM33Q9BZ11 813 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 PABPC3Q9H361 631 aaKnown RBP18.53■□□□□ 0.56
PFN1-201ENST00000225655 OSGEPQ9NPF4 335 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 TAS2R14Q9NYV8 317 aa18.53■□□□□ 0.56
PFN1-201ENST00000225655 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.53■□□□□ 0.56
PFN1-201ENST00000225655 TARSL2A2RTX5 802 aaKnown RBP18.52■□□□□ 0.56
PFN1-201ENST00000225655 SH3BP5O60239 455 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 RNASEH1O60930 286 aaKnown RBP18.52■□□□□ 0.56
PFN1-201ENST00000225655 SIN3BO75182 1162 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 GRAP2O75791 330 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 CER1O95813 267 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 ZNF883P0CG24 379 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 SPINK2P20155 84 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 FECHP22830 423 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 MATKP42679 507 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms