RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 POMCP01189 267 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 AOC1P19801 751 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 PPIDQ08752 370 aaKnown RBP22.69■■□□□ 1.22
CCDC9-201ENST00000221922 TRMT5Q32P41 509 aaKnown RBP22.69■■□□□ 1.22
CCDC9-201ENST00000221922 CD300LGQ6UXG3 332 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 DTX3LQ8TDB6 740 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 MYLPFQ96A32 169 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 EPAS1Q99814 870 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 CEP41Q9BYV8 373 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 STN1Q9H668 368 aaKnown RBP22.69■■□□□ 1.22
CCDC9-201ENST00000221922 EIF4E1BA6NMX2 242 aaKnown RBP22.69■■□□□ 1.22
CCDC9-201ENST00000221922 FAM72CH0Y354 149 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 B3GAT3O94766 335 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 ALDOAP04075 364 aaKnown RBP22.69■■□□□ 1.22
CCDC9-201ENST00000221922 POLBP06746 335 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 ELNP15502 786 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 ALDH18A1P54886 795 aaKnown RBP22.69■■□□□ 1.22
CCDC9-201ENST00000221922 KDSRQ06136 332 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 ITGA7Q13683 1181 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 SPANXN3Q5MJ09 141 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 FAM72AQ5TYM5 149 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 FAM72DQ6L9T8 149 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 ZCCHC23Q6ZST2 131 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 FAM72BQ86X60 149 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 COLEC11Q9BWP8 271 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 NOD1Q9Y239 953 aa22.69■■□□□ 1.22
CCDC9-201ENST00000221922 PRR5-ARHGAP8B1AHC4 643 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 INPPL1O15357 1258 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 GLRA3O75311 464 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 PTPN3P26045 913 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 SERPINB6P35237 376 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 ARHGAP8P85298 464 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 TUBB3Q13509 450 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 RCN2Q14257 317 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 TEDDM1Q5T9Z0 273 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 PACS1Q6VY07 963 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 BHLHA9Q7RTU4 235 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 ULK2Q8IYT8 1036 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 UNC5BQ8IZJ1 945 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 NETO2Q8NC67 525 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 PPFIBP2Q8ND30 876 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 ZNF778Q96MU6 729 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 RILPQ96NA2 401 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 EBF4Q9BQW3 602 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 TRIM62Q9BVG3 475 aa22.68■■□□□ 1.22
CCDC9-201ENST00000221922 TRMT13Q9NUP7 481 aaKnown RBP22.68■■□□□ 1.22
CCDC9-201ENST00000221922 ERI2A8K979 691 aaKnown RBP22.67■■□□□ 1.22
CCDC9-201ENST00000221922 FGF3P11487 239 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-201ENST00000221922 RABGGTBP53611 331 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 ACTR3P61158 418 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 CRADDP78560 199 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 PDE1CQ14123 709 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-201ENST00000221922 BSPRYQ5W0U4 402 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 ZNF598Q86UK7 904 aaKnown RBP22.67■■□□□ 1.22
CCDC9-201ENST00000221922 WDR75Q8IWA0 830 aaKnown RBP22.67■■□□□ 1.22
CCDC9-201ENST00000221922 SCML4Q8N228 414 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 PIWIL2Q8TC59 973 aaKnown RBP22.67■■□□□ 1.22
CCDC9-201ENST00000221922 ATP2A3Q93084 1043 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 HDAC11Q96DB2 347 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 PKMYT1Q99640 499 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 WDCPQ9H6R7 721 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 SYBUQ9NX95 663 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 RNF186Q9NXI6 227 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 DCDC2Q9UHG0 476 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 TRHDEQ9UKU6 1024 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 ANGPTL2Q9UKU9 493 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 AP2A1O95782 977 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 CXCR3P49682 368 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 SP3Q02447 781 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 N4BP2L1Q5TBK1 243 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-201ENST00000221922 RIPOR1Q6ZS17 1223 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 PAXIP1Q6ZW49 1069 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-201ENST00000221922 MYLK4Q86YV6 388 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-201ENST00000221922 PANX3Q96QZ0 392 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 ANLNQ9NQW6 1124 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 TXNDC16Q9P2K2 825 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 DNAJB4Q9UDY4 337 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 SLC7A8Q9UHI5 535 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 WASF2Q9Y6W5 498 aa22.67■■□□□ 1.22
CCDC9-201ENST00000221922 PATJQ8NI35 1801 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 ARHGEF37A1IGU5 675 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 KCNK1O00180 336 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 PLIN3O60664 434 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 CIB2O75838 187 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 CPOXP36551 454 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 BRCC3P46736 316 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 RABGAP1LQ5R372 815 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 MAP3K21Q5TCX8 1036 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 ITPRIPL1Q6GPH6 555 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 PM20D1Q6GTS8 502 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 RNF180Q86T96 592 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 PPP1R14CQ8TAE6 165 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 RSPH1Q8WYR4 309 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 VAT1Q99536 393 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 THTPAQ9BU02 230 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 LRRC40Q9H9A6 602 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 FRMPD3Q5JV73 1810 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 TPP1O14773 563 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 MAP3K7O43318 606 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 ITM2AO43736 263 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms