RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ARL14EPQ8N8R7 260 aaPredicted RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 TDRD5Q8NAT2 981 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 C2orf49Q9BVC5 232 aaPredicted RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 TSSK1BQ9BXA7 367 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 GPR62Q9BZJ7 368 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 XYLT2Q9H1B5 865 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 FAM124BQ9H5Z6 455 aaPredicted RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 PTPRHQ9HD43 1115 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 CHCHD3Q9NX63 227 aaKnown RBP9.61□□□□□ -0.87
CCDC113-201ENST00000219299 STK39Q9UEW8 545 aa9.61□□□□□ -0.87
CCDC113-201ENST00000219299 NCANO14594 1321 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 PTGESO14684 152 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TBL1XO60907 577 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 LRCH4O75427 683 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 SUPT3HO75486 399 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TIMP1P01033 207 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 IL10P22301 178 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 MAP4P27816 1152 aaKnown RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 KDSRQ06136 332 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TTC23LQ6PF05 361 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 CREG2Q8IUH2 290 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 POF1BQ8WVV4 589 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 BORCS6Q96GS4 357 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 IGSF21Q96ID5 467 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TMEM175Q9BSA9 504 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 FOXP3Q9BZS1 431 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TM6SF2Q9BZW4 377 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 ZYG11BQ9C0D3 744 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 KDM4CQ9H3R0 1056 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 PKD2L2Q9NZM6 624 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 MYH9P35579 1960 aaKnown RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 RNASEH1O60930 286 aaKnown RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 USP12O75317 370 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 NR2C2P49116 596 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 SLC12A1Q13621 1099 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 ZRANB3Q5FWF4 1079 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 ACBD5Q5T8D3 534 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 DNAJB7Q7Z6W7 309 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TMEM130Q8N3G9 435 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 NAT16Q8N8M0 369 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 ZBTB18Q99592 522 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 CCDC90BQ9GZT6 254 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 UBA2Q9UBT2 640 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 ARAP2Q8WZ64 1704 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 ADGRA2Q96PE1 1338 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 H3BQF6 201 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TBC1D4O60343 1298 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 DDHD2O94830 711 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TBX18O95935 607 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 CYP1A1P04798 512 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 KRT8P05787 483 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 CCDC159P0C7I6 412 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TMTC4Q5T4D3 741 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 SPDYE1Q8NFV5 336 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 USP13Q92995 863 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 FICDQ9BVA6 458 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TMEM120BA0PK00 339 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 SMAPO00193 183 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 KPNA3O00505 521 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 ATP5BP06576 529 aaKnown RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 UBTFL6P0CB48 400 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 ZSCAN5DPP0CG00 497 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 GJA1P17302 382 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 TPH1P17752 444 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 GEMIN4P57678 1058 aaKnown RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 CCDC15Q0P6D6 951 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 UPP1Q16831 310 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 LONRF1Q17RB8 773 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 FRA10AC1Q70Z53 315 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 RIBC1Q8N443 379 aaPredicted RBP9.6□□□□□ -0.87
CCDC113-201ENST00000219299 ANKLE1Q8NAG6 615 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 KLHL23Q8NBE8 558 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 CASKIN2Q8WXE0 1202 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 STRA6Q9BX79 667 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 NPHS2Q9NP85 383 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 SALL4Q9UJQ4 1053 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 FBXL21Q9UKT6 434 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 COG5Q9UP83 839 aa9.6□□□□□ -0.87
CCDC113-201ENST00000219299 AFF1P51825 1210 aaKnown RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 ZNF135P52742 658 aaPredicted RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 SLC29A2Q14542 456 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 STARD3Q14849 445 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 KCTD19Q17RG1 926 aaPredicted RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 CCNYL1Q8N7R7 359 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 PBXIP1Q96AQ6 731 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 RBAK-RBAKDNI3L0D1 243 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 KRT75O95678 551 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 EDN1P05305 212 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 UNGP13051 313 aaPredicted RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 PTPN2P17706 415 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 AARSP49588 968 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 FLOT2Q14254 428 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 BRMS1LQ5PSV4 323 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 C1orf220Q5T0J3 134 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 POLNQ7Z5Q5 900 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 FAM126BQ8IXS8 530 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 ZNF461Q8TAF7 563 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 TOX2Q96NM4 488 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 BCO2Q9BYV7 579 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms