RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 GALNTL6Q49A17 601 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ACCSLQ4AC99 568 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 PCID2Q5JVF3 399 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 FBXO47Q5MNV8 452 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ARHGAP17Q68EM7 881 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 BICRALQ6AI39 1079 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 OTOP1Q7RTM1 612 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 HDDC2Q7Z4H3 204 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 CHSY1Q86X52 802 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 TBC1D21Q8IYX1 336 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 KRT78Q8N1N4 520 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 SFRP1Q8N474 314 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 EPB41L4BQ9H329 900 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ANKHQ9HCJ1 492 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 VPS45Q9NRW7 570 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 VPS51Q9UID3 782 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 GNPTGQ9UJJ9 305 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 VAV3Q9UKW4 847 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 TOGARAM1Q9Y4F4 1720 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 PLIN4Q96Q06 1357 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 TIAM2Q8IVF5 1701 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 GSAPA4D1B5 854 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 PMM2O15305 246 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 RGS5O15539 181 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ALOX15P16050 662 aaPredicted RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 GRK4P32298 578 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 EIF2B2P49770 351 aaKnown RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 BCAP31P51572 246 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ATP6V0D1P61421 351 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 LAMTOR4Q0VGL1 99 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 SMARCB1Q12824 385 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 TRAF2Q12933 501 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 PGM5Q15124 567 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 MIIPQ5JXC2 388 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 TMEM63BQ5T3F8 832 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 OTOAQ7RTW8 1153 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ZNF605Q86T29 641 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 CDK20Q8IZL9 346 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 SLC16A10Q8TF71 515 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 UCMAQ8WVF2 138 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 MTERF3Q96E29 417 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 PPP1R36Q96LQ0 422 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ZNF512Q96ME7 567 aaPredicted RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 NLNQ9BYT8 704 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 PIGUQ9H490 435 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 EHD1Q9H4M9 534 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 MOV10Q9HCE1 1003 aaKnown RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 HPS4Q9NQG7 708 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 EIF2B3Q9NR50 452 aaKnown RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 RHBDL2Q9NX52 303 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 MAGEL2Q9UJ55 1249 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 TRIP11Q15643 1979 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ALS2Q96Q42 1657 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ZSCAN5CA6NGD5 496 aaPredicted RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 TRIM38O00635 465 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 PRMT5O14744 637 aaPredicted RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 UGT2B11O75310 529 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 SNRPB2P08579 225 aaKnown RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 CYP2A6P11509 494 aaPredicted RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 PMS1P54277 932 aaKnown RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 GRM3Q14832 879 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 SLC15A2Q16348 729 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 R3HCC1LQ7Z5L2 792 aaKnown RBP4.49□□□□□ -1.69
CHD9-201ENST00000219084 UNC5BQ8IZJ1 945 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 TCAIMQ8N3R3 496 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 STAG3L4Q8TBR4 150 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 ZNF606Q8WXB4 792 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 PPP3R2Q96LZ3 170 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 CPVLQ9H3G5 476 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 OSGEPQ9NPF4 335 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 CATSPERZQ9NTU4 200 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 INTS13Q9NVM9 706 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.49□□□□□ -1.692e-7■■■■□ 23.5
CHD9-201ENST00000219084 DAPK2Q9UIK4 370 aa4.49□□□□□ -1.69
CHD9-201ENST00000219084 KBTBD13C9JR72 458 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 E9PBE3 544 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 POLRMTO00411 1230 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 MYL12BO14950 172 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 FAM20BO75063 409 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 TULP3O75386 442 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 C6orf222P0C671 652 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 TFE3P19532 575 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 KDELR1P24390 212 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 POU5F1Q01860 360 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 DLG1Q12959 904 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 C10orf120Q5SQS8 335 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 LRRC55Q6ZSA7 311 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 SV2AQ7L0J3 742 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ZNF438Q7Z4V0 828 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 SPATA19Q7Z5L4 167 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ROPN1LQ96C74 230 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 TARS2Q9BW92 718 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 SENP6Q9GZR1 1112 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 POPDC2Q9HBU9 364 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 IARS2Q9NSE4 1012 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 SNX6Q9UNH7 406 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 CLCA2Q9UQC9 943 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 HBS1LQ9Y450 684 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 MYPNQ86TC9 1320 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 CCDC182A6NF36 153 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms