RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 RNF103O00237 685 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 EPHB6O15197 1021 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 BNIP3LO60238 219 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 MT-CO1P00395 513 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 ATXN1LP0C7T5 689 aaKnown RBP22.76■■□□□ 1.23
VTI1B-201ENST00000216456 CTSKP43235 329 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 GRIA4P48058 902 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 CXCR3P49682 368 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 ADPRHP54922 357 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 ACCSLQ4AC99 568 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 IL27RAQ6UWB1 636 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.76■■□□□ 1.23
VTI1B-201ENST00000216456 Q6ZVU0 165 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 KDF1Q8NAX2 398 aaPredicted RBP22.76■■□□□ 1.23
VTI1B-201ENST00000216456 BAHD1Q8TBE0 780 aaPredicted RBP22.76■■□□□ 1.23
VTI1B-201ENST00000216456 PSMB7Q99436 277 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 GANQ9H2C0 597 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 TOR4AQ9NXH8 423 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 ARHGEF38Q9NXL2 777 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 MPP6Q9NZW5 540 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 ADAMTS1Q9UHI8 967 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 SCML1Q9UN30 329 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 MSRB2Q9Y3D2 182 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 NYNRINQ9P2P1 1898 aaKnown RBP22.76■■□□□ 1.23
VTI1B-201ENST00000216456 DMXL2Q8TDJ6 3036 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.75■■□□□ 1.23
VTI1B-201ENST00000216456 F8VZ95 297 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 K7ERQ8 282 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 RTN2O75298 545 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 ZNF883P0CG24 379 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 GABRB2P47870 512 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 ZNF177Q13360 481 aaPredicted RBP22.75■■□□□ 1.23
VTI1B-201ENST00000216456 SLC12A1Q13621 1099 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 TEAD4Q15561 434 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 ZNF423Q2M1K9 1284 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 TTC39BQ5VTQ0 682 aaPredicted RBP22.75■■□□□ 1.23
VTI1B-201ENST00000216456 NAA35Q5VZE5 725 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 DBX2Q6ZNG2 339 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 ADAT2Q7Z6V5 191 aaKnown RBP22.75■■□□□ 1.23
VTI1B-201ENST00000216456 ERICH1Q86X53 443 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 OR2T34Q8NGX1 318 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 GPT2Q8TD30 523 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 RHBDD1Q8TEB9 315 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 C18orf8Q96DM3 657 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 WDCPQ9H6R7 721 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 OSGEPQ9NPF4 335 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 VPS28Q9UK41 221 aa22.75■■□□□ 1.23
VTI1B-201ENST00000216456 GFPT2O94808 682 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 GJB6O95452 261 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 GOT1P17174 413 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 C5AR1P21730 350 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 GLDCP23378 1020 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 BPIFB4P59827 614 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 DEUP1Q05D60 604 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 ELAVL3Q14576 367 aaKnown RBP22.74■■□□□ 1.23
VTI1B-201ENST00000216456 DLG2Q15700 870 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 C5orf22Q49AR2 442 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 TFAP2DQ7Z6R9 452 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 EMC1Q8N766 993 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 EPS8L1Q8TE68 723 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 ADAMTS14Q8WXS8 1223 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 NT5C3BQ969T7 300 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 CFAP57Q96MR6 1250 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 DACH1Q9UI36 760 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 FZD4Q9ULV1 537 aa22.74■■□□□ 1.23
VTI1B-201ENST00000216456 CHD6Q8TD26 2715 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 CABIN1Q9Y6J0 2220 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 A0A0D9SEW6 157 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 LRRC72A6NJI9 287 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 ATP9BO43861 1147 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 ADH1BP00325 375 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 MAT2AP31153 395 aaKnown RBP22.73■■□□□ 1.23
VTI1B-201ENST00000216456 NNMTP40261 264 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 RACK1P63244 317 aaKnown RBP22.73■■□□□ 1.23
VTI1B-201ENST00000216456 NOMO3P69849 1222 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 SULT2A1Q06520 285 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 HNRNPDQ14103 355 aaKnown RBP22.73■■□□□ 1.23
VTI1B-201ENST00000216456 KRT31Q15323 416 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 LINGO4Q6UY18 593 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 SND1Q7KZF4 910 aaKnown RBP eCLIP22.73■■□□□ 1.23
VTI1B-201ENST00000216456 GATAD2AQ86YP4 633 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 ZCCHC14Q8WYQ9 949 aaKnown RBP22.73■■□□□ 1.23
VTI1B-201ENST00000216456 STK33Q9BYT3 514 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 MAGEB5Q9BZ81 275 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 MUC3BQ9H195 1237 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 AASDHPPTQ9NRN7 309 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 SLC25A13Q9UJS0 675 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 TMEM59LQ9UK28 342 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 NOCTQ9UK39 431 aaKnown RBP22.73■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D30Q9Y2I9 924 aa22.73■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D3DA0A087WVF3 549 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D3IA0A087WXS9 549 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D3EA0A087X179 549 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D3KA0A087X1G2 549 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D3FA6NER0 549 aaPredicted RBP22.72■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D3LB9A6J9 549 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 SMAD6O43541 496 aaKnown RBP22.72■■□□□ 1.23
VTI1B-201ENST00000216456 CLDN11O75508 207 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 TRIM16O95361 564 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 CTSLP07711 333 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms