RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 NSRP1Q9H0G5 558 aaKnown RBP22.6■■□□□ 1.21
HOXC8-201ENST00000040584 PRDM12Q9H4Q4 367 aa22.6■■□□□ 1.21
HOXC8-201ENST00000040584 ANAPC5Q9UJX4 755 aa22.6■■□□□ 1.21
HOXC8-201ENST00000040584 AGO1Q9UL18 857 aaKnown RBP22.6■■□□□ 1.21
HOXC8-201ENST00000040584 H7C0C1 242 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 TTC4O95801 387 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 TACR2P21452 398 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 SLC6A4P31645 630 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 ATP5OP48047 213 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 LACTB2Q53H82 288 aaPredicted RBP22.59■■□□□ 1.21
HOXC8-201ENST00000040584 ARHGAP15Q53QZ3 475 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 FAM133BQ5BKY9 247 aaKnown RBP22.59■■□□□ 1.21
HOXC8-201ENST00000040584 RFWD3Q6PCD5 774 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 DARS2Q6PI48 645 aaKnown RBP22.59■■□□□ 1.21
HOXC8-201ENST00000040584 PRUNE1Q86TP1 453 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 SUGP1Q8IWZ8 645 aaKnown RBP22.59■■□□□ 1.21
HOXC8-201ENST00000040584 OLFM3Q96PB7 478 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 APOL5Q9BWW9 433 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 CDC42EP4Q9H3Q1 356 aaKnown RBP22.59■■□□□ 1.21
HOXC8-201ENST00000040584 KDM4CQ9H3R0 1056 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 CATSPERBQ9H7T0 1116 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 COLQQ9Y215 455 aaPredicted RBP22.59■■□□□ 1.21
HOXC8-201ENST00000040584 SZT2Q5T011 3432 aa22.59■■□□□ 1.21
HOXC8-201ENST00000040584 IVDP26440 423 aa22.58■■□□□ 1.21
HOXC8-201ENST00000040584 MLLT1Q03111 559 aaPredicted RBP22.58■■□□□ 1.21
HOXC8-201ENST00000040584 TRIP13Q15645 432 aaPredicted RBP22.58■■□□□ 1.21
HOXC8-201ENST00000040584 RARS2Q5T160 578 aaKnown RBP22.58■■□□□ 1.21
HOXC8-201ENST00000040584 ING5Q8WYH8 240 aa22.58■■□□□ 1.21
HOXC8-201ENST00000040584 AZIN2Q96A70 460 aa22.58■■□□□ 1.21
HOXC8-201ENST00000040584 ZNF317Q96PQ6 595 aaPredicted RBP22.58■■□□□ 1.21
HOXC8-201ENST00000040584 CCDC77Q9BR77 488 aa22.58■■□□□ 1.21
HOXC8-201ENST00000040584 TASP1Q9H6P5 420 aa22.58■■□□□ 1.21
HOXC8-201ENST00000040584 DZANK1Q9NVP4 752 aa22.58■■□□□ 1.21
HOXC8-201ENST00000040584 SGK1O00141 431 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 FGF10O15520 208 aaPredicted RBP22.58■■□□□ 1.2
HOXC8-201ENST00000040584 GREM1O60565 184 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 CNTN5O94779 1100 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 PFKLP17858 780 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 DDX6P26196 483 aaKnown RBP eCLIP22.58■■□□□ 1.2
HOXC8-201ENST00000040584 ADCY8P40145 1251 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 XRCC4Q13426 336 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 ITIH4Q14624 930 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 ACBD5Q5T8D3 534 aaPredicted RBP22.58■■□□□ 1.2
HOXC8-201ENST00000040584 CCDC25Q86WR0 208 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 CMTM8Q8IZV2 173 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 LGI2Q8N0V4 545 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 EFHBQ8N7U6 833 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 GLIS1Q8NBF1 620 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 CCDC197Q8NCU1 140 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 ITFG1Q8TB96 612 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 MDM1Q8TC05 714 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 ATXN2LQ8WWM7 1075 aaKnown RBP22.58■■□□□ 1.2
HOXC8-201ENST00000040584 RPRD1AQ96P16 312 aaPredicted RBP22.58■■□□□ 1.2
HOXC8-201ENST00000040584 ADAM7Q9H2U9 754 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 TTYH1Q9H313 450 aaPredicted RBP22.58■■□□□ 1.2
HOXC8-201ENST00000040584 NDFIP2Q9NV92 336 aa22.58■■□□□ 1.2
HOXC8-201ENST00000040584 PPARGC1AQ9UBK2 798 aaKnown RBP22.58■■□□□ 1.2
HOXC8-201ENST00000040584 MRPS23Q9Y3D9 190 aaKnown RBP22.58■■□□□ 1.2
HOXC8-201ENST00000040584 IGLV3-10A0A075B6K4 115 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 ZNF197O14709 1029 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 TRDMT1O14717 391 aaKnown RBP22.57■■□□□ 1.2
HOXC8-201ENST00000040584 PAPLNO95428 1278 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 CEBPBP17676 345 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 GDF10P55107 478 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 IFI35P80217 286 aaPredicted RBP22.57■■□□□ 1.2
HOXC8-201ENST00000040584 ALFQ53S48 1182 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 POTEHQ6S545 545 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 ZYG11BQ9C0D3 744 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 LRRC4CQ9HCJ2 640 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 CFAP97Q9P2B7 532 aa22.57■■□□□ 1.2
HOXC8-201ENST00000040584 DRGXA6NNA5 263 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 F5H5T6 163 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 ETS1P14921 441 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 AVPR1AP37288 418 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 ITGA8P53708 1063 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 CBX2Q14781 532 aaPredicted RBP22.56■■□□□ 1.2
HOXC8-201ENST00000040584 QPCTQ16769 361 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 FAM182AQ5T1J6 154 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 ADGRF1Q5T601 910 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 TMEM184AQ6ZMB5 413 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 BZW1Q7L1Q6 419 aaKnown RBP22.56■■□□□ 1.2
HOXC8-201ENST00000040584 TFAP2DQ7Z6R9 452 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 CIR1Q86X95 450 aaPredicted RBP22.56■■□□□ 1.2
HOXC8-201ENST00000040584 CFAP52Q8N1V2 620 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 RTL3Q8N8U3 475 aaKnown RBP22.56■■□□□ 1.2
HOXC8-201ENST00000040584 FAM71DQ8N9W8 422 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 EPS8L3Q8TE67 593 aaKnown RBP22.56■■□□□ 1.2
HOXC8-201ENST00000040584 RSAD2Q8WXG1 361 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 CELF6Q96J87 481 aaKnown RBP22.56■■□□□ 1.2
HOXC8-201ENST00000040584 ZSWIM3Q96MP5 696 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 KLC2Q9H0B6 622 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 CDH22Q9UJ99 828 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 CCL26Q9Y258 94 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 CLUHO75153 1309 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 TRIOBPQ9H2D6 2365 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 BCLAF3A2AJT9 711 aaKnown RBP22.56■■□□□ 1.2
HOXC8-201ENST00000040584 TP73O15350 636 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 ZSCAN5DPP0CG00 497 aa22.56■■□□□ 1.2
HOXC8-201ENST00000040584 STIP1P31948 543 aaKnown RBP22.56■■□□□ 1.2
HOXC8-201ENST00000040584 GRIN2CQ14957 1233 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms