RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Actrt1Q9D9J3 376 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Myh7Q91Z83 1935 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Slfn8B1ARD8 910 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 AunipE9Q6Z5 340 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Mup13L7N222 235 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Tekt4Q149S1 447 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Cyp3a13Q64464 503 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Szrd1Q6NXN1 152 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Lmo3Q8BZL8 145 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 TcimQ9D915 106 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Zyg11aA2BFL2 627 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 DcxO88809 366 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Dpep1P31428 410 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Tmem65Q4VAE3 234 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Fbxl5Q8C2S5 690 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Creld1Q91XD7 420 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Necab2Q91ZP9 389 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Map4k3Q99JP0 894 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 GsdmcQ99NB5 468 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pik3cgQ9JHG7 1102 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Lama4P97927 1816 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Ces1bD3Z5G7 567 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Erich1E9PY43 332 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 AvilO88398 819 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Adcy1O88444 1118 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Sat1P48026 171 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Tarbp2P97473 365 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Mbtd1Q6P5G3 631 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Parp6Q6P6P7 630 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Ankrd52Q8BTI7 1076 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Unc45aQ99KD5 944 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 PllpQ9DCU2 182 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 H2afyQ9QZQ8 372 aaKnown RBP15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Ttc23lA6H6E9 458 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 XntrpcF8VQM8 1264 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Rgs4O08899 205 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Htr2cP34968 459 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pcbp1P60335 356 aaKnown RBP15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Cdh9P70407 786 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Zc3h15Q3TIV5 426 aaKnown RBP15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Bfsp2Q6NVD9 416 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Trim14Q8BVW3 440 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Tmem154Q8C4Q9 181 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 OlahQ8R197 265 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Lpin3Q99PI4 848 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Trpc2Q9R244 1172 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Cldn3Q9Z0G9 219 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 OmdO35103 423 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Atp5bP56480 529 aaKnown RBP15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Grid2ipQ0QWG9 1203 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Nab1Q61122 486 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 RhocQ62159 193 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gpsm1Q6IR34 673 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Aste1Q8BIR2 672 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Tmtc3Q8BRH0 920 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Sh2d3cQ9QZS8 854 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Brwd3A2AHJ4 1799 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Ttll9A2APC3 461 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 SprtnG3X912 497 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Rgs2O08849 211 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Per1O35973 1291 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Col1a1P11087 1453 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gsta3P30115 221 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gp1bbP56400 206 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Rgl2Q61193 778 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Tdrd12Q9CWU0 1215 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Cyp2c55Q9D816 490 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Ppp2r3cQ9JK24 453 aa15.82■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Zfp985A2A7A5 519 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gm6205E9PZS2 359 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gm5152L7N200 190 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 YwhaqP68254 245 aaKnown RBP15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pfkfb2P70265 519 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 HexdcQ3U4H6 486 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Sh3rf1Q69ZI1 892 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gm6367Q8C6L9 287 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 BicralQ8CHH5 1074 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Hacd3Q8K2C9 362 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pcdha1Q91Y21 948 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gm43518A0A0G2JGB6 165 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Prrg1A2BFE8 218 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Slc9b2Q5BKR2 547 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Mvb12bQ6KAU4 317 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 NgrnQ99KS2 293 aaKnown RBP15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Vps28Q9D1C8 221 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 D3Z070 196 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gm8257E9Q8R3 264 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 PrkcdP28867 674 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Ccna2P51943 422 aaKnown RBP15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pik3r6Q3U6Q4 756 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pld5Q3UNN8 536 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Phlda1Q62392 405 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Wee2Q66JT0 555 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Disc1Q811T9 852 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 SowahaQ8BLS7 548 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Klhl28Q9CR40 571 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 DpysQ9EQF5 519 aa15.81■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Cyp2j12G3UXT0 502 aa15.8■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Hoxc6P10629 235 aa15.8■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 DcstampQ7TNJ0 470 aa15.8■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms