RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Trib2Q8K4K3 343 aa11.61□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Rbm47Q91WT8 590 aaKnown RBP11.61□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Pcdhb2Q91Y00 799 aa11.61□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Micu3Q9CTY5 523 aa11.61□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Prss23Q9D6X6 382 aa11.61□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Tk2Q9R088 270 aa11.61□□□□□ -0.55
Ddx55-201ENSMUST00000071057 LipaQ9Z0M5 397 aa11.61□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Dcst2A0A140LIJ0 701 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Tmem45a2B7ZWJ5 289 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm6205E9PZS2 359 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm3383J3QQ59 259 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm3424L7N298 263 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm3239L7N2D9 227 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm8246M0QWX9 263 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Dpf3P58269 378 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 PhbP67778 272 aaKnown RBP11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 SPINDOCQ05AH6 381 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Aarsd1Q3THG9 412 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Rhpn2Q8BWR8 686 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm6367Q8C6L9 287 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Colgalt1Q8K297 617 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 ItpkaQ8R071 459 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Slc13a3Q91Y63 600 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Pex6Q99LC9 981 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Cadm3Q99N28 396 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 MceeQ9D1I5 178 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Spaca7Q9D2S4 182 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm9774A0A0A6YVU8 407 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm36028A0A0U1RPM1 299 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Rnf19bA2A7Q9 732 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Nup62clA2AG10 272 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Ces1bD3Z5G7 567 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 C87414E9PWI7 475 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm340F6RGI3 1242 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Ptpn9O35239 593 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 RngttO55236 597 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 ShdO88834 343 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 PenkP22005 268 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Echdc2Q3TLP5 296 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Bcap31Q61335 245 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Grid1Q61627 1009 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Ndrg1Q62433 394 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Nim1kQ8BHI9 436 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gpr20Q8BYC4 358 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 AgpsQ8C0I1 645 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Ago3Q8CJF9 860 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Abcf3Q8K268 709 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 HibchQ8QZS1 385 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Unc93b1Q8VCW4 598 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 MrgpreQ91ZB7 310 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Lrp8Q924X6 996 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 NamptQ99KQ4 491 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 4930449I24RikQ9D5E3 319 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Tbc1d20Q9D9I4 402 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Ndufa13Q9ERS2 144 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Tspan3Q9QY33 253 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 St6galnac4Q9R2B6 360 aa11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Igf2rQ07113 2483 aaKnown RBP11.6□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Itpripl1A2ASA8 547 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Cbfa2t2O70374 594 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Sypl2O89104 264 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Il3P01586 166 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Tsta3P23591 321 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Tuba4aP68368 448 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Smad1P70340 465 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Fscn2Q32M02 492 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Tmem26Q3UP23 366 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Tp53i13Q5F267 385 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 CpQ61147 1061 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Sp140Q6NSQ5 534 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Xpo1Q6P5F9 1071 aaKnown RBP11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Rad9bQ6WBX7 403 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 RbakQ8BQC8 711 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Snx8Q8CFD4 459 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Rell1Q8K2J7 272 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gsto2Q8K2Q2 248 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Pcolce2Q8R4W6 414 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Pcdhb6Q91XZ4 772 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Timm22Q9CQ85 194 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Dnaaf1Q9D2H9 634 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 TtpalQ9D3D0 343 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Ccdc103Q9D9P2 237 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Slc25a19Q9DAM5 318 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Plscr2Q9DCW2 307 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Oxct2aQ9JJN4 520 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Acox2Q9QXD1 681 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gm13276A0A087WR18 182 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Arhgap42B2RQE8 841 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Vmn2r100E9QAZ9 850 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Mup13L7N222 235 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Anxa8O35640 327 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Adam19O35674 920 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 AlbP07724 608 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Fgfr1P16092 822 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Psma2P49722 234 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Dlg3P70175 849 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Fmo3P97501 534 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Gpr15Q0VDU3 360 aa11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Alkbh5Q3TSG4 395 aaKnown RBP11.59□□□□□ -0.55
Ddx55-201ENSMUST00000071057 Vps51Q3UVL4 782 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms