RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Prrg1A2BFE8 218 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Elk3P41971 409 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Rgs16P97428 201 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Glt6d1Q2NKH9 311 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Awat2Q6E1M8 333 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Pgrmc2Q80UU9 217 aaKnown RBP12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Mrps35Q8BJZ4 320 aaKnown RBP12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Tmed11Q9D2R4 215 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 H2bfmQ9DAB5 224 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 SpastQ9QYY8 614 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Smok3aC0HKC8 504 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Smok3bC0HKC9 504 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Gm3033M0QWI0 180 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Gm3532M0QWL4 194 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Lpar1P61793 364 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Klra6Q60653 266 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Slc25a38Q91XD8 326 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Pcdhac1Q91Y10 964 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Lrrc49Q91YK0 686 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Txndc12Q9CQU0 170 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Vps28Q9D1C8 221 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Slit1Q80TR4 1531 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Fgl2P12804 432 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Tcf3P15806 651 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Phka1P18826 1241 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 LvrnQ2KHK3 559 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 SyncripQ7TMK9 623 aaKnown RBP12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Plbd1Q8VCI0 550 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Pbld2Q9CXN7 288 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Cyp2s1Q9DBX6 501 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Fam96aQ9DCL2 160 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Rc3h2P0C090 1187 aaKnown RBP12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 PrkcqQ02111 707 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Ag2Q3UPL5 249 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Pik3r5Q5SW28 871 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Dlg4Q62108 724 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Arhgef33Q8BW86 850 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Ubqln1Q8R317 582 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Erp27Q9D8U3 272 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 CluhQ5SW19 1315 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Klhl32A2AJX0 620 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Tab3Q571K4 716 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Iqcf4Q6P8Y2 204 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Dsg1bQ7TSF1 1060 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Ugt2a1Q80X89 528 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 RybpQ8CCI5 228 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Akr1c21Q91WR5 323 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Mrpl9Q99N94 265 aaKnown RBP12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Creb3l1Q9Z125 519 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Krt28A6BLY7 462 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Kifc5bE9PUA5 672 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 AcadlP51174 430 aaKnown RBP12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Kbtbd8Q3UQV5 599 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 TufmQ8BFR5 452 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Afg3l2Q8JZQ2 802 aaKnown RBP12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Olfr1302Q8VGE9 315 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hdhd5Q91WM2 419 aa12.61□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Frmd7A2AD83 703 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 MtrA6H5Y3 1253 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Kcnu1O54982 1121 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 H2-AaP01910 256 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Gm4951Q3UED7 406 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Svs6Q64356 99 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Spata20Q80YT5 790 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Efcab12V9GXH0 673 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Gm7275E9Q1B3 247 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Dppa5bP85965 119 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Aars2Q14CH7 980 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Mars2Q499X9 586 aaKnown RBP12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Zfp90Q61967 636 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Epc2Q8C0I4 808 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Kct2Q8K201 259 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Znf24Q91VN1 368 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Zfp61Q923D1 555 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Izumo2Q9DA16 220 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Rab27aQ9ERI2 221 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Arhgef10Q8C033 1345 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Smok3cA0A087WSF2 504 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Armt1A6H630 439 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Il4i1O09046 630 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Tuba4aP68368 448 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Pla2g6P97819 807 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Itga4Q00651 1039 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 LcorlQ3U285 600 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Gstt2Q61133 244 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 ChpfQ6IQX7 774 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Asb14Q8C6Y6 587 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Spdye4bQ8CDE8 236 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 IrgqQ8VIM9 583 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Satl1Q9D5N8 744 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Nrf1Q9WU00 503 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hist1h2abC0HKE1 130 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hist1h2acC0HKE2 130 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hist1h2adC0HKE3 130 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hist1h2aeC0HKE4 130 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hist1h2agC0HKE5 130 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hist1h2aiC0HKE6 130 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hist1h2anC0HKE7 130 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hist1h2aoC0HKE8 130 aa12.6□□□□□ -0.39
Vcpip1-201ENSMUST00000057438 Hist1h2apC0HKE9 130 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms