RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Mpp5Q9JLB2 675 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Neu2Q9JMH3 379 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 DonsonQ9QXP4 560 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rp1l1Q8CGM2 1859 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tnfrsf11bO08712 401 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 ChkaO54804 453 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 LdhcP00342 332 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Prf1P10820 554 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 BtkP35991 659 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Yap1P46938 488 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Acot8P58137 320 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Itga4Q00651 1039 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Galnt10Q6P9S7 603 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tas2r129Q7M709 320 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ccnt2Q7TQK0 723 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Olfr213Q7TS32 327 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 TdrkhQ80VL1 560 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rbm22Q8BHS3 420 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Noc4lQ8BHY2 516 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Usp43Q8BUM9 1132 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gbp5Q8CFB4 590 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ipo11Q8K2V6 975 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gdap1l1Q8VE33 370 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Olfr784Q8VFZ9 319 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Dok4Q99KE3 325 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 CoprsQ9CQ13 173 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Dpysl5Q9EQF6 564 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Vwa5b1A9Z1V5 1215 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Dthd1E9PZX1 795 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zfp94E9Q6Y4 486 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gm14496K7N5U4 849 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gm3424L7N298 263 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gm8246M0QWX9 263 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gfra2O08842 464 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 FaahO08914 579 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Chrna4O70174 629 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gpr3P35413 330 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 CidecP56198 239 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 E2f2P56931 443 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Nt5dc3Q3UHB1 546 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Phactr4Q501J7 694 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Q6PAC4 1279 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ppp1r15bQ8BFW3 697 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gpr20Q8BYC4 358 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Sit1Q8C503 180 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Znf668Q8K2R5 619 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pcdhb11Q91UZ8 797 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Msantd4Q91YU3 345 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Decr1Q9CQ62 335 aaKnown RBP8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Kbtbd12Q9D618 625 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Smok2bQ9QYZ3 484 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Smok2aQ9QYZ6 504 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tmed2Q9R0Q3 201 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rfc2Q9WUK4 349 aaKnown RBP8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 PtprfA2A8L5 1898 aa8.9□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fam209A2APA5 170 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Vmn2r88L7N1W8 857 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Folh1O35409 752 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Casp4P70343 373 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Q3UTZ3 580 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Grik1Q60934 836 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gas6Q61592 674 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Trnau1apQ80VC6 287 aaKnown RBP8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ofcc1Q8BGX4 166 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 4933402J07RikQ8BHX0 270 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Shc2Q8BMC3 573 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Lancl3Q8CD19 420 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ago1Q8CJG1 857 aaKnown RBP8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr847Q8VFF4 312 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Stk33Q924X7 491 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tas1r2Q925I4 843 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Arl2Q9D0J4 184 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cpxm2Q9D2L5 764 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ephx1Q9D379 455 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Atp6v1e2Q9D593 226 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Oser1Q9D722 291 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 1700013H16RikQ9DAC5 291 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Trpc4Q9QUQ5 974 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sept3Q9Z1S5 350 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Umodl1Q5DID3 1319 aa8.9□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fibcd1A2AV25 459 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 PdgfrbP05622 1098 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gja1P23242 382 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Atxn10P28658 475 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tead2P48301 445 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Pitx1P70314 315 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cct5P80316 541 aaKnown RBP8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Igsf9Q05BQ1 1179 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fzd6Q61089 709 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sh3gl2Q62420 352 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Arhgap30Q640N3 1101 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cand1Q6ZQ38 1230 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mgat5bQ765H6 792 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 SrlQ7TQ48 910 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Got1l1Q7TSV6 404 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fbxl21Q8BFZ4 434 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Slc38a9Q8BGD6 560 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Smoc1Q8BLY1 463 aaKnown RBP8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 E330017A01RikQ8BU47 192 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ddx18Q8K363 660 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms