RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Slc39a3Q99K24 317 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nkd1Q99MH6 471 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tmbim6Q9D2C7 237 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Prkar1aQ9DBC7 381 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Acsl4Q9QUJ7 711 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm14401A2ARV7 303 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lsp1P19973 330 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 NfycP70353 335 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pou1f1Q00286 291 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Stt3bQ3TDQ1 823 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mthfd1lQ3V3R1 977 aaKnown RBP10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 MelkQ61846 643 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ptger2Q62053 362 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tab1Q8CF89 502 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Zbtb8bQ8CII0 484 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nudt13Q8JZU0 352 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Snrnp48Q9D361 337 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dip2bQ3UH60 1574 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pcna-ps2A0A140T8V5 261 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Klhl4B1AZR0 717 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mtnd4P03911 459 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 PcnaP17918 261 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rbm46P86049 533 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Adam2Q60718 735 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Usp6nlQ80XC3 819 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dnajc19Q9CQV7 116 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Aldh1b1Q9CZS1 519 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 AcadsbQ9DBL1 432 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fam71aB7XG49 585 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 GzmgP13366 248 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 IgfalsP70389 603 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Abcg2Q7TMS5 657 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cpne3Q8BT60 533 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ugt2b34Q8K154 532 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Zdhhc3Q8R173 299 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ift46Q9DB07 301 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mxra8Q9DBV4 442 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Serpina1fQ9DCQ7 411 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Stk16O88697 305 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 L1camP11627 1260 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc16a1P53986 493 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 HpcaP84075 193 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gata5P97489 404 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Myl12bQ3THE2 172 aaKnown RBP10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Znf583Q3V080 568 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Psen2Q61144 448 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mapre3Q6PER3 281 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 McubQ810S1 345 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slx1bQ8BX32 270 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lca5lQ8C0X0 741 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mcfd2Q8K5B2 145 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Stk32cQ8QZV4 488 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Hkdc1Q91W97 915 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Bhmt2Q91WS4 363 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 PpidQ9CR16 370 aaKnown RBP10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Snx10Q9CWT3 201 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Snx29Q9D3S3 818 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lrrc71Q9D3W5 558 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Doc2gQ9ESN1 387 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Prl2c5Q9JLV9 222 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Asb4Q9WV71 426 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trim63Q38HM4 350 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trmt2aQ8BNV1 574 aaKnown RBP10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gprc6aQ8K4Z6 928 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 1700129C05RikQ9CQ77 218 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Sept12Q9D451 317 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tbc1d21Q9D9D3 336 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gria4Q9Z2W8 902 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 AlpiF8VPQ6 554 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm3278L7N2D2 218 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trmt13Q8BYH3 481 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tbc1d17Q8BYH7 645 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gfm2Q8R2Q4 779 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ifi44lQ9BDB7 447 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Akr1e2Q9DCT1 301 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mta2Q9R190 668 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trip6Q9Z1Y4 480 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 BC061212Q6P8K3 481 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gpatch2lQ6PE65 482 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 HlfQ8BW74 295 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Olfr1467Q8VFW1 308 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trim8Q99PJ2 551 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Serpinb1aQ9D154 379 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 MispQ9D279 648 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Atp5oQ9DB20 213 aaKnown RBP10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Paqr5Q9DCU0 330 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ehd3Q9QXY6 535 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Epb41l1Q9Z2H5 879 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pabpc1P29341 636 aaKnown RBP10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nos2P29477 1144 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nt5dc3Q3UHB1 546 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 MogQ61885 246 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Baiap2Q8BKX1 535 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fam126bQ8C729 530 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gstm4Q8R5I6 218 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 S100a14Q9D2Q8 104 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Habp4Q9JKS5 411 aaKnown RBP10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Zfp612A0A1D5RMC2 672 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Grik3B1AS29 919 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Barx2O08686 283 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms