RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CERS4Q9HA82 394 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 MAN1C1Q9NR34 630 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 SCAMP3O14828 347 aaKnown RBP18.03■□□□□ 0.48
PHGDH-232ENST00000641947 MAFKO60675 156 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 CLASP2O75122 1294 aaKnown RBP18.03■□□□□ 0.48
PHGDH-232ENST00000641947 TTC4O95801 387 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 MBL2P11226 248 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-232ENST00000641947 PSMB4P28070 264 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 CD68P34810 354 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-232ENST00000641947 SGSHP51688 502 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 ERVK-21P61565 698 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 COG7P83436 770 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 SEMA5AQ13591 1074 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 C5orf22Q49AR2 442 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 CEP85LQ5SZL2 805 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 DENND2CQ68D51 928 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 LRRC31Q6UY01 552 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 LGI2Q8N0V4 545 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 CFAP52Q8N1V2 620 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 RPRD1AQ96P16 312 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-232ENST00000641947 TGS1Q96RS0 853 aaKnown RBP18.03■□□□□ 0.48
PHGDH-232ENST00000641947 TSPYL1Q9H0U9 437 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 MED4Q9NPJ6 270 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 AGO1Q9UL18 857 aaKnown RBP18.03■□□□□ 0.48
PHGDH-232ENST00000641947 C2orf16Q68DN1 1984 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 SZT2Q5T011 3432 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 MYLKQ15746 1914 aa18.03■□□□□ 0.48
PHGDH-232ENST00000641947 E7ESA3 106 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 TRDMT1O14717 391 aaKnown RBP18.02■□□□□ 0.48
PHGDH-232ENST00000641947 NDC80O14777 642 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 GREM1O60565 184 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 OPHN1O60890 802 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 AVILO75366 819 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 APRTP07741 180 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 HARS2P49590 506 aaKnown RBP18.02■□□□□ 0.48
PHGDH-232ENST00000641947 PAPOLAP51003 745 aaKnown RBP18.02■□□□□ 0.48
PHGDH-232ENST00000641947 PDIA2Q13087 525 aaKnown RBP18.02■□□□□ 0.48
PHGDH-232ENST00000641947 CAND1Q86VP6 1230 aaKnown RBP18.02■□□□□ 0.48
PHGDH-232ENST00000641947 UMODL1-AS1Q8N2C9 162 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 ATPAF2Q8N5M1 289 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 LZTR1Q8N653 840 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 SERPINB12Q96P63 405 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 TSGA13Q96PP4 275 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 RUFY1Q96T51 708 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 CORO1BQ9BR76 489 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 BRD8Q9H0E9 1235 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 PCDHA11Q9Y5I1 949 aa18.02■□□□□ 0.48
PHGDH-232ENST00000641947 A0A1W2PRU2 124 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 CCDC85CA6NKD9 419 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 PER2O15055 1255 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 ALOX15BO15296 676 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 ZBTB24O43167 697 aaPredicted RBP18.02■□□□□ 0.47
PHGDH-232ENST00000641947 GRIA1P42261 906 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 GPM6BQ13491 265 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 PPM1LQ5SGD2 360 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 C4orf22Q6V702 233 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 ADGRD2Q7Z7M1 963 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 ANKMY2Q8IV38 441 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 ZBED8Q8IZ13 594 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 HMCESQ96FZ2 354 aa18.02■□□□□ 0.47
PHGDH-232ENST00000641947 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.02■□□□□ 0.47
PHGDH-232ENST00000641947 BPTFQ12830 3046 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 MIA3Q5JRA6 1907 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-232ENST00000641947 F5H5T6 163 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 H3BNC9 293 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 RNF40O75150 1001 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 MYL4P12829 197 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 TPSB2P20231 275 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 ARL4CP56559 192 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 CBX1P83916 185 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 SMAD3P84022 425 aaKnown RBP18.01■□□□□ 0.47
PHGDH-232ENST00000641947 TPSAB1Q15661 275 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 PABPC1LQ4VXU2 614 aaKnown RBP18.01■□□□□ 0.47
PHGDH-232ENST00000641947 CENPUQ71F23 418 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 IGDCC3Q8IVU1 814 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 CNTD1Q8N815 330 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 MAB21L3Q8N8X9 362 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 USP33Q8TEY7 942 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 PBX4Q9BYU1 374 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 KLHL8Q9P2G9 620 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-232ENST00000641947 IGSF9Q9P2J2 1179 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 CPQQ9Y646 472 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 CLUHO75153 1309 aa18.01■□□□□ 0.47
PHGDH-232ENST00000641947 MYOFQ9NZM1 2061 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 MYO9BQ13459 2157 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 SMAPO00193 183 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 MOSPD3O75425 235 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 STK10O94804 968 aaKnown RBP18■□□□□ 0.47
PHGDH-232ENST00000641947 PEX11BO96011 259 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 JCHAINP01591 159 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 HDCP19113 662 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 CCNCP24863 283 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 SLC11A2P49281 568 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 RPS24P62847 133 aaKnown RBP18■□□□□ 0.47
PHGDH-232ENST00000641947 ZNF33AQ06730 810 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 GPS2Q13227 327 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 TEX44Q53QW1 395 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 PID1Q7Z2X4 250 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 OR52K2Q8NGK3 314 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms