RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 TRABDQ9H4I3 376 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 CYP4F11Q9HBI6 524 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 NKIRAS1Q9NYS0 192 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 MYO18AQ92614 2054 aaKnown RBP17.7■□□□□ 0.42
PHGDH-208ENST00000641023 IQANK1A0A1B0GTG1 560 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 AP2A1O95782 977 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 FAM107AO95990 144 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 IGLV3-27P01718 113 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 URODP06132 367 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 CSH1P0DML2 217 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 CSH2P0DML3 217 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 CCNB1P14635 433 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 RHOQP17081 205 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 CD68P34810 354 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-208ENST00000641023 ATP5C1P36542 298 aaKnown RBP17.69■□□□□ 0.42
PHGDH-208ENST00000641023 ALDH1A3P47895 512 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 PRPSAP1Q14558 356 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 ARTNQ5T4W7 220 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 CASC4Q6P4E1 433 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 DDX53Q86TM3 631 aaKnown RBP17.69■□□□□ 0.42
PHGDH-208ENST00000641023 LRRC6Q86X45 466 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 MPP5Q8N3R9 675 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 DCAKDQ8WVC6 231 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 STAMBPL1Q96FJ0 436 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 CCT8L2Q96SF2 557 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 PRMT1Q99873 361 aaKnown RBP17.69■□□□□ 0.42
PHGDH-208ENST00000641023 NAT9Q9BTE0 207 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 NDFIP2Q9NV92 336 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 HBS1LQ9Y450 684 aaKnown RBP17.69■□□□□ 0.42
PHGDH-208ENST00000641023 PCDHA11Q9Y5I1 949 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 MRPL42Q9Y6G3 142 aaKnown RBP17.69■□□□□ 0.42
PHGDH-208ENST00000641023 NUP205Q92621 2012 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 MKI67P46013 3256 aaKnown RBP17.69■□□□□ 0.42
PHGDH-208ENST00000641023 LTBP2Q14767 1821 aa17.69■□□□□ 0.42
PHGDH-208ENST00000641023 COL4A6Q14031 1691 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 MATN3O15232 486 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 MAFKO60675 156 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 PIAS1O75925 651 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 SUN1O94901 812 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 HMBSP08397 361 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 ACRP10323 421 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 PRKCHP24723 683 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 GBP2P32456 591 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-208ENST00000641023 TAF12Q16514 161 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 SNX30Q5VWJ9 437 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 CYS1Q717R9 158 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 SLC26A11Q86WA9 606 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 ZSCAN18Q8TBC5 510 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-208ENST00000641023 SLC44A1Q8WWI5 657 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 NACA2Q9H009 215 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 DNMT3LQ9UJW3 386 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 SMG5Q9UPR3 1016 aaKnown RBP17.68■□□□□ 0.42
PHGDH-208ENST00000641023 TTLL3Q9Y4R7 772 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 GREB1Q4ZG55 1949 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 FAM47DPA6NHR8 397 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 SEC24AO95486 1093 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 NFKB1P19838 968 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 PPM1AP35813 382 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 NDST2P52849 883 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 SESN2P58004 480 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-208ENST00000641023 AFMIDQ63HM1 303 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 CTAGE3PQ8IX95 158 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 UMODL1-AS1Q8N2C9 162 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 ANKRD42Q8N9B4 389 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 CCDC134Q9H6E4 229 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 TMEM248Q9NWD8 314 aa17.68■□□□□ 0.42
PHGDH-208ENST00000641023 IGLV3-10A0A075B6K4 115 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 HSPA8P11142 646 aaKnown RBP17.67■□□□□ 0.42
PHGDH-208ENST00000641023 SLC18A1P54219 525 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 RAB33AQ14088 237 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 RAP1GAP2Q684P5 730 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 FBXL22Q6P050 247 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 ARHGAP36Q6ZRI8 547 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 PRPF39Q86UA1 669 aaKnown RBP17.67■□□□□ 0.42
PHGDH-208ENST00000641023 ZNF683Q8IZ20 524 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 MGARPQ8TDB4 240 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 CHMP6Q96FZ7 201 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 SGSM3Q96HU1 749 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 MYRFLQ96LU7 910 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 STK39Q9UEW8 545 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 KIAA0100Q14667 2235 aaKnown RBP17.67■□□□□ 0.42
PHGDH-208ENST00000641023 ZNF840PA6NDX5 716 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 AP3B1O00203 1094 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 PRPF4O43172 522 aaKnown RBP eCLIP17.67■□□□□ 0.423e-6■■■■□ 19.9
PHGDH-208ENST00000641023 PSMD3O43242 534 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 MGAT1P26572 445 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 ELF1P32519 619 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 PAPOLAP51003 745 aaKnown RBP17.67■□□□□ 0.42
PHGDH-208ENST00000641023 SPARCL1Q14515 664 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 VEPH1Q14D04 833 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 ANO4Q32M45 955 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 HECTD3Q5T447 861 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 LGSNQ5TDP6 509 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 KCTD11Q693B1 232 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 KLHDC10Q6PID8 442 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 OTOP2Q7RTS6 562 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 TAX1BP1Q86VP1 789 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 PPM1NQ8N819 430 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 DNAAF3Q8N9W5 541 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 GORASP1Q9BQQ3 440 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms