RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 UROC1Q96N76 676 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 CATSPER2Q96P56 530 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 CIPCQ9C0C6 399 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 TRIM45Q9H8W5 580 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 FAM32AQ9Y421 112 aaKnown RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 ATP5C1P36542 298 aaKnown RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 LRRC74AQ0VAA2 488 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 PTP4A2Q12974 167 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 PRPF18Q99633 342 aaKnown RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 SLC25A13Q9UJS0 675 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 FAM95CA0A1B0GW59 222 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 DAB1O75553 588 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 MYL4P12829 197 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 CDKN2BP42772 138 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 NETO2Q8NC67 525 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 ZNF555Q8NEP9 628 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 TEKT4Q8WW24 435 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 SIKE1Q9BRV8 207 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 ZCWPW1Q9H0M4 648 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 KCNK4Q9NYG8 393 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 GGA2Q9UJY4 613 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 ANKRD6Q9Y2G4 727 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 PCDHB12Q9Y5F1 795 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 TREHO43280 583 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 TSPAN1O60635 241 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 MTA2O94776 668 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 BRCC3P46736 316 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 NAGLUP54802 743 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 MBTD1Q05BQ5 628 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 XRCC4Q13426 336 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 NOMO2Q5JPE7 1267 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 VTI1BQ9UEU0 232 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 SYNDIG1LA6NDD5 238 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 MSCO60682 206 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 PSMA4P25789 261 aaKnown RBP17.9■□□□□ 0.46
SCARB2-223ENST00000640640 KRT72Q14CN4 511 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 SPDYE7PQ495Y7 208 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 LZICQ8WZA0 190 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 P2RY11Q96G91 374 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 ZFP42Q96MM3 310 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 TSPAN18Q96SJ8 248 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 PCDHA11Q9Y5I1 949 aa17.9■□□□□ 0.46
SCARB2-223ENST00000640640 MYO1GB0I1T2 1018 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 C5orf58C9J3I9 102 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 NR5A2O00482 541 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 RAG1P15918 1043 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 ENPEPQ07075 957 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 RAP1GAP2Q684P5 730 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 ANKRD23Q86SG2 305 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 FBXO39Q8N4B4 442 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 TBC1D19Q8N5T2 526 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 JADE3Q92613 823 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 CEP19Q96LK0 163 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 MORF4L1Q9UBU8 362 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 CRYL1Q9Y2S2 319 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 RAD54BQ9Y620 910 aa17.89■□□□□ 0.46
SCARB2-223ENST00000640640 PMM2O15305 246 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 PIGNO95427 931 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 PEX5P50542 639 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 BST1Q10588 318 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 ZNF284Q2VY69 593 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 LRRC23Q53EV4 343 aaPredicted RBP17.89■□□□□ 0.45
SCARB2-223ENST00000640640 WASHC2DQ5SRD0 308 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 SLC4A11Q8NBS3 891 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 ROBO1Q9Y6N7 1651 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 ZNF142P52746 1687 aaPredicted RBP17.89■□□□□ 0.45
SCARB2-223ENST00000640640 PLOD1Q02809 727 aaPredicted RBP17.89■□□□□ 0.45
SCARB2-223ENST00000640640 NFYCQ13952 458 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 ANKS6Q68DC2 871 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 GLT6D1Q7Z4J2 308 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 SNX13Q9Y5W8 968 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 ZNF536O15090 1300 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 A0A0G2JLL6 359 aaPredicted RBP17.89■□□□□ 0.45
SCARB2-223ENST00000640640 PRKAR2AP13861 404 aaKnown RBP17.89■□□□□ 0.45
SCARB2-223ENST00000640640 PAX3P23760 479 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 WEE1P30291 646 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 ADRA1BP35368 520 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 FLT3LGP49771 235 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 PKN3Q6P5Z2 889 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 PRRT2Q7Z6L0 340 aaPredicted RBP17.89■□□□□ 0.45
SCARB2-223ENST00000640640 TEX12Q9BXU0 123 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 SPASTQ9UBP0 616 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 TRIM17Q9Y577 477 aa17.89■□□□□ 0.45
SCARB2-223ENST00000640640 A0A1W2PPM1 405 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 HOXB8P17481 243 aaPredicted RBP17.88■□□□□ 0.45
SCARB2-223ENST00000640640 SP3Q02447 781 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 TUSC3Q13454 348 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 NOL9Q5SY16 702 aaKnown RBP17.88■□□□□ 0.45
SCARB2-223ENST00000640640 PMF1Q6P1K2 205 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 LRRC15Q8TF66 581 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 UNGP13051 313 aaPredicted RBP17.88■□□□□ 0.45
SCARB2-223ENST00000640640 MZF1P28698 734 aaPredicted RBP17.88■□□□□ 0.45
SCARB2-223ENST00000640640 GBE1Q04446 702 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 GRIK3Q13003 919 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 NR6A1Q15406 480 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 CSPG4P5Q96PW8 444 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 SH3GL2Q99962 352 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 RNF208Q9H0X6 261 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 FZD8Q9H461 694 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 RBPJLQ9UBG7 517 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms