RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 VCPIP1Q96JH7 1222 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 MED10Q9BTT4 135 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 NAA15Q9BXJ9 866 aaKnown RBP11.98□□□□□ -0.49
MECP2-226ENST00000640414 XYLT2Q9H1B5 865 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 GANQ9H2C0 597 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 TMEM245Q9H330 911 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 APOBEC3GQ9HC16 384 aaKnown RBP11.98□□□□□ -0.49
MECP2-226ENST00000640414 ASCL3Q9NQ33 180 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 PRSS16Q9NQE7 514 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 GDF3Q9NR23 364 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 AASDHPPTQ9NRN7 309 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 KRT82Q9NSB4 513 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 IMPACTQ9P2X3 320 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 CAPN11Q9UMQ6 739 aa11.98□□□□□ -0.49
MECP2-226ENST00000640414 ATP8B3O60423 1300 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 A0A1W2PR77 199 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 FAM47DPA6NHR8 397 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 USP12O75317 370 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 STC2O76061 302 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 BEST1O76090 585 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 ASS1P00966 412 aaKnown RBP11.97□□□□□ -0.49
MECP2-226ENST00000640414 GP1BBP13224 206 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 UCHL3P15374 230 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 TRIM21P19474 475 aaKnown RBP11.97□□□□□ -0.49
MECP2-226ENST00000640414 CD38P28907 300 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 CASP14P31944 242 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 PIK3CAP42336 1068 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 LSSP48449 732 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 ADKP55263 362 aaKnown RBP11.97□□□□□ -0.49
MECP2-226ENST00000640414 ARID5AQ03989 594 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 ARID5BQ14865 1188 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 WDR72Q3MJ13 1102 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 TTC31Q49AM3 519 aaPredicted RBP11.97□□□□□ -0.49
MECP2-226ENST00000640414 CDCP2Q5VXM1 449 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 SPOPLQ6IQ16 392 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 ATG14Q6ZNE5 492 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 RRAGAQ7L523 313 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 ARHGEF19Q8IW93 802 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 SMARCD1Q96GM5 515 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 SMOQ99835 787 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 EDEM3Q9BZQ6 932 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 FBXO44Q9H4M3 255 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 NMUR1Q9HB89 426 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 UBE2TQ9NPD8 197 aaPredicted RBP11.97□□□□□ -0.49
MECP2-226ENST00000640414 APEX2Q9UBZ4 518 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 DNAJC12Q9UKB3 198 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 AJAP1Q9UKB5 411 aaPredicted RBP11.97□□□□□ -0.49
MECP2-226ENST00000640414 FHOD1Q9Y613 1164 aa11.97□□□□□ -0.49
MECP2-226ENST00000640414 A0A1W2PQJ5 194 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 CYP26A1O43174 497 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 TIMM44O43615 452 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 AP1G2O75843 785 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 RARGP13631 454 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.49
MECP2-226ENST00000640414 CHKAP35790 457 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 RXRGP48443 463 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 NXPH1P58417 271 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 TNNC1P63316 161 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 FNDC3BQ53EP0 1204 aaKnown RBP11.96□□□□□ -0.49
MECP2-226ENST00000640414 KLHDC10Q6PID8 442 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 GPRIN1Q7Z2K8 1008 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 FUKQ8N0W3 1084 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 TC2NQ8N9U0 490 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 CYB5D2Q8WUJ1 264 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 KAT5Q92993 513 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 KREMEN1Q96MU8 473 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 NT5C1BQ96P26 610 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 STK33Q9BYT3 514 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 POLR1BQ9H9Y6 1135 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 NLRC4Q9NPP4 1024 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 THSD1Q9NS62 852 aa11.96□□□□□ -0.49
MECP2-226ENST00000640414 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.96□□□□□ -0.494e-6■■□□□ 13.4
MECP2-226ENST00000640414 LUC7L2Q9Y383 392 aaKnown RBP11.96□□□□□ -0.49
MECP2-226ENST00000640414 ARID1BQ8NFD5 2236 aaPredicted RBP11.96□□□□□ -0.49
MECP2-226ENST00000640414 A0A1W2PQH9 124 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 C10orf142B7Z368 130 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 AKR1B15C9JRZ8 316 aaPredicted RBP11.95□□□□□ -0.5
MECP2-226ENST00000640414 TRIM38O00635 465 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 SIGLEC6O43699 453 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 ATICP31939 592 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 KRT9P35527 623 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 GALCP54803 685 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 ZBED6P86452 979 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 TRIM14Q14142 442 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 LINC00303Q3SY05 128 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 C10orf120Q5SQS8 335 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 NCEH1Q6PIU2 408 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 CCDC81Q6ZN84 652 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 PPM1KQ8N3J5 372 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 CCDC150Q8NCX0 1101 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 TAF4BQ92750 862 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 IQCDQ96DY2 449 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 DEPDC7Q96QD5 511 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 SLC2A11Q9BYW1 496 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 VRTNQ9H8Y1 702 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 ERVMER34-1Q9H9K5 563 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 FBRSQ9HAH7 460 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 STARD5Q9NSY2 213 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 SERGEFQ9UGK8 458 aa11.95□□□□□ -0.5
MECP2-226ENST00000640414 ZNF510Q9Y2H8 683 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms