RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CEP41Q9BYV8 373 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ALG13Q9NP73 1137 aaKnown RBP15.47■□□□□ 0.07
TRIM3-215ENST00000639856 NPHS2Q9NP85 383 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 TMEM39AQ9NV64 488 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 MKS1Q9NXB0 559 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 SEPT10Q9P0V9 454 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 NUDT5Q9UKK9 219 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 RAD54BQ9Y620 910 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 COL4A6Q14031 1691 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 WDR27A2RRH5 827 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 C2CD2LO14523 706 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ZNF189O75820 626 aaPredicted RBP15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ALDH1A2O94788 518 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 F9P00740 461 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 PSMB4P28070 264 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 SERPINB9P50453 376 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 TPI1P60174 286 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 USP46P62068 366 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 KCNJ2P63252 427 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 SNCBQ16143 134 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 NFE2Q16621 373 aaPredicted RBP15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ARL13BQ3SXY8 428 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 CDHR3Q6ZTQ4 885 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 PDZD4Q76G19 769 aaPredicted RBP15.47■□□□□ 0.07
TRIM3-215ENST00000639856 CCNJLQ8IV13 435 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 TP53INP2Q8IXH6 220 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 DEPDC1BQ8WUY9 529 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 TSSK1BQ9BXA7 367 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 CRISPLD1Q9H336 500 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 NMUR1Q9HB89 426 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ARHGEF3Q9NR81 526 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 IGSF9Q9P2J2 1179 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 MSI1O43347 362 aaKnown RBP15.46■□□□□ 0.07
TRIM3-215ENST00000639856 VNN2O95498 520 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 CPB1P15086 417 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 ITGB8P26012 769 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 SERPINB4P48594 390 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 CXCR3P49682 368 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 BMPR2Q13873 1038 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 C1orf53Q5VUE5 145 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 CASC4Q6P4E1 433 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 PRSS55Q6UWB4 352 aaPredicted RBP15.46■□□□□ 0.07
TRIM3-215ENST00000639856 ARNTL2Q8WYA1 636 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 FUBP3Q96I24 572 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRIM3-215ENST00000639856 TMEM175Q9BSA9 504 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 TKTL2Q9H0I9 626 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 WDCPQ9H6R7 721 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 OSER1Q9NX31 292 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 SLC27A5Q9Y2P5 690 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 PLLPQ9Y342 182 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 PCDHB5Q9Y5E4 795 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 PLXNA3P51805 1871 aa15.46■□□□□ 0.07
TRIM3-215ENST00000639856 A0A1W2PQH9 124 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 HMX2A2RU54 273 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 NCAM2O15394 837 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 PARNO95453 639 aaKnown RBP15.46■□□□□ 0.06
TRIM3-215ENST00000639856 CNTFP26441 200 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 MNAT1P51948 309 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 LRRC26Q2I0M4 334 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 RNF19BQ6ZMZ0 732 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 PID1Q7Z2X4 250 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 PAWRQ96IZ0 340 aaKnown RBP15.46■□□□□ 0.06
TRIM3-215ENST00000639856 NAT9Q9BTE0 207 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 TXLNGQ9NUQ3 528 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 SFMBT1Q9UHJ3 866 aa15.46■□□□□ 0.06
TRIM3-215ENST00000639856 OR6C75A6NL08 312 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 KCNK1O00180 336 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 KLF11O14901 512 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 ATP5HO75947 161 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 IL1BP01584 269 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 IGLV3-25P01717 112 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 CLTBP09497 229 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 NEFHP12036 1026 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 MGAT1P26572 445 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 SESN2P58004 480 aaPredicted RBP15.45■□□□□ 0.06
TRIM3-215ENST00000639856 CRADDP78560 199 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 IKBKEQ14164 716 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 BTBD8Q5XKL5 378 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 CNKSR3Q6P9H4 555 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 MARK2Q7KZI7 788 aaKnown RBP15.45■□□□□ 0.06
TRIM3-215ENST00000639856 NLRP9Q7RTR0 991 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 CASP10Q92851 521 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 C8orf48Q96LL4 319 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 VN1R3Q9BXE9 311 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 TRIM55Q9BYV6 548 aa15.45■□□□□ 0.06
TRIM3-215ENST00000639856 LAMA2P24043 3122 aaKnown RBP15.45■□□□□ 0.06
TRIM3-215ENST00000639856 MTMR11A4FU01 709 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 CHUKO15111 745 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 TBC1D4O60343 1298 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 TGDSO95455 350 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 PGAM1P18669 254 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 BGNP21810 368 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 ZNF135P52742 658 aaPredicted RBP15.44■□□□□ 0.06
TRIM3-215ENST00000639856 PPIDQ08752 370 aaKnown RBP15.44■□□□□ 0.06
TRIM3-215ENST00000639856 OVGP1Q12889 678 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 RIPK1Q13546 671 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 SPDYAQ5MJ70 313 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 MROH9Q5TGP6 573 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 FAM117BQ6P1L5 589 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 TIFABQ6ZNK6 161 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms