RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 USP46P62068 366 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 ATG9AQ7Z3C6 839 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 RPRD1AQ96P16 312 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-228ENST00000638155 KCND2Q9NZV8 630 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 GMPPBQ9Y5P6 360 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 GH2P01242 217 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 GHRP10912 638 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 CPA3P15088 417 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 NFKB1P19838 968 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 RAB43Q86YS6 212 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 OR5T3Q8NGG3 340 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 IPCEF1Q8WWN9 437 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-228ENST00000638155 TOP3BO95985 862 aaKnown RBP13.34□□□□□ -0.27
UBE3A-228ENST00000638155 MAPK7Q13164 816 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 NAA30Q147X3 362 aaPredicted RBP13.34□□□□□ -0.27
UBE3A-228ENST00000638155 MTF1Q14872 753 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 AADATQ8N5Z0 425 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 GPER1Q99527 375 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 SEC31BQ9NQW1 1179 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 COMMD3-BMI1R4GMX3 469 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 TSPAN1O60635 241 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 PKN1Q16512 942 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 RFX4Q33E94 735 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 OGFRL1Q5TC84 451 aaPredicted RBP13.34□□□□□ -0.27
UBE3A-228ENST00000638155 DNAJC14Q6Y2X3 702 aaPredicted RBP13.34□□□□□ -0.27
UBE3A-228ENST00000638155 SLC4A11Q8NBS3 891 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 BHMTQ93088 406 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 GMCL1Q96IK5 515 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF668Q96K58 619 aaPredicted RBP13.34□□□□□ -0.27
UBE3A-228ENST00000638155 ACOT9Q9Y305 439 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 PCDHGA10Q9Y5H3 936 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 POLR1AO95602 1720 aaPredicted RBP13.34□□□□□ -0.27
UBE3A-228ENST00000638155 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 PIH1D2Q8WWB5 315 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 PCDH12Q9NPG4 1184 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 SUCOQ9UBS9 1254 aaKnown RBP13.34□□□□□ -0.27
UBE3A-228ENST00000638155 PCDHB2Q9Y5E7 798 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 UCHL3P15374 230 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 GRK5P34947 590 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 RAP1GAPP47736 663 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 USPL1Q5W0Q7 1092 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 PLET1Q6UQ28 207 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.34□□□□□ -0.274e-9■■■■□ 20.3
UBE3A-228ENST00000638155 OGDHLQ9ULD0 1010 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 TDRKHQ9Y2W6 561 aaKnown RBP13.34□□□□□ -0.27
UBE3A-228ENST00000638155 UPP2O95045 317 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 AADACL4Q5VUY2 407 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 RASGEF1AQ8N9B8 481 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 FEZF2Q8TBJ5 459 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 KAT2BQ92831 832 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 AIFM3Q96NN9 605 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 ZCCHC2Q9C0B9 1178 aaKnown RBP13.34□□□□□ -0.27
UBE3A-228ENST00000638155 WDR19Q8NEZ3 1342 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 BPNT1O95861 308 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 PTPN3P26045 913 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 EPHB2P29323 1055 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 CRATP43155 626 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 TNKS2Q9H2K2 1166 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 HPF1Q9NWY4 346 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 RNF181Q9P0P0 153 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 MEMO1Q9Y316 297 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 PRKAB2O43741 272 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF248Q8NDW4 579 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 TESCQ96BS2 214 aa13.34□□□□□ -0.27
UBE3A-228ENST00000638155 FGFR1P11362 822 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 GP5P40197 560 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 GPAT2Q6NUI2 795 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 WDR59Q6PJI9 974 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 POTEHQ6S545 545 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 DEF8Q6ZN54 512 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 C10orf107Q8IVU9 208 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 MED11Q9P086 117 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 SAMD4AQ9UPU9 718 aaKnown RBP13.33□□□□□ -0.27
UBE3A-228ENST00000638155 DMTF1Q9Y222 760 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 PMF1-BGLAPU3KQ54 211 aa13.33□□□□□ -0.27
UBE3A-228ENST00000638155 CSHL1Q14406 222 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 PDK2Q15119 407 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 C11orf63Q6NUN7 778 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 CDADC1Q9BWV3 514 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 IFT46Q9NQC8 304 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 USP11P51784 963 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 RAPSNQ13702 412 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 ACAP2Q15057 778 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 TDRPQ86YL5 185 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 FBXO39Q8N4B4 442 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 OR56A4Q8NGH8 313 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 MCOLN3Q8TDD5 553 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 TMEM159Q96B96 161 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 SPACA7Q96KW9 195 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 MID1IP1Q9NPA3 183 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 NDOR1Q9UHB4 597 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 CDH7Q9ULB5 785 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 PCDHA10Q9Y5I2 948 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 UGT2B15P54855 530 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 ZNF548Q8NEK5 533 aaPredicted RBP13.33□□□□□ -0.28
UBE3A-228ENST00000638155 OR6J1Q8NGC5 347 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 HTRA1Q92743 480 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms