RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 WDCPQ9H6R7 721 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 SAMSN1Q9NSI8 373 aaKnown RBP18.47■□□□□ 0.55
PNKP-225ENST00000636214 TAB2Q9NYJ8 693 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 VPS28Q9UK41 221 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 CLDN11O75508 207 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 GJB3O75712 270 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 LSM8O95777 96 aaKnown RBP18.46■□□□□ 0.55
PNKP-225ENST00000636214 F9P00740 461 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 ZNF883P0CG24 379 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 C7P10643 843 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 SPINK2P20155 84 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 GRIA4P48058 902 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 C21orf59P57076 290 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 CENPCQ03188 943 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 DEUP1Q05D60 604 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 EIF4EBP2Q13542 120 aaPredicted RBP18.46■□□□□ 0.55
PNKP-225ENST00000636214 TRIP6Q15654 476 aaKnown RBP18.46■□□□□ 0.55
PNKP-225ENST00000636214 HLA-BQ31612 363 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 ACCSLQ4AC99 568 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 BRMS1LQ5PSV4 323 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 C9orf64Q5T6V5 341 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 KIAA0895LQ68EN5 471 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 UNQ6494/PRO21346Q6UXR6 183 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 LRRC31Q6UY01 552 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 BIRC7Q96CA5 298 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 MUC3BQ9H195 1237 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 TM7SF3Q9NS93 570 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 SLCO3A1Q9UIG8 710 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 FZD4Q9ULV1 537 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 USP24Q9UPU5 2620 aa18.46■□□□□ 0.55
PNKP-225ENST00000636214 PAGE1O75459 146 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 IL1BP01584 269 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 MZF1P28698 734 aaPredicted RBP18.45■□□□□ 0.54
PNKP-225ENST00000636214 SLC8A1P32418 973 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 SCNN1AP37088 669 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 NUMBP49757 651 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 STK19P49842 368 aaPredicted RBP18.45■□□□□ 0.54
PNKP-225ENST00000636214 CDH4P55283 916 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 ACBD5Q5T8D3 534 aaPredicted RBP18.45■□□□□ 0.54
PNKP-225ENST00000636214 STK40Q8N2I9 435 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 OR2T34Q8NGX1 318 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 OR8D1Q8WZ84 308 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 STK33Q9BYT3 514 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 TKTL2Q9H0I9 626 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 TM9SF3Q9HD45 589 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 OSGEPQ9NPF4 335 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 HS3ST4Q9Y661 456 aa18.45■□□□□ 0.54
PNKP-225ENST00000636214 NYNRINQ9P2P1 1898 aaKnown RBP18.44■□□□□ 0.54
PNKP-225ENST00000636214 F8VZ95 297 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 GOLGA8SH3BPF8 625 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 HYAL3O43820 417 aaPredicted RBP18.44■□□□□ 0.54
PNKP-225ENST00000636214 RHOCP08134 193 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 ZNF18P17022 549 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 C5AR1P21730 350 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 CDH5P33151 784 aaPredicted RBP18.44■□□□□ 0.54
PNKP-225ENST00000636214 GGCXP38435 758 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 PLK1P53350 603 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 KRT83P78385 493 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 KCNMA1Q12791 1236 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 FAM46CQ5VWP2 391 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 NCEH1Q6PIU2 408 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 OR14C36Q8NHC7 312 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 C1orf216Q8TAB5 229 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 ENOX1Q8TC92 643 aaKnown RBP18.44■□□□□ 0.54
PNKP-225ENST00000636214 IGSF8Q969P0 613 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 CAMK1GQ96NX5 476 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 SPAG5Q96R06 1193 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 ACE2Q9BYF1 805 aaPredicted RBP18.44■□□□□ 0.54
PNKP-225ENST00000636214 NEUROG2Q9H2A3 272 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 PIGVQ9NUD9 493 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 LMBRD1Q9NUN5 540 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 TPX2Q9ULW0 747 aaKnown RBP18.44■□□□□ 0.54
PNKP-225ENST00000636214 APOBEC2Q9Y235 224 aaKnown RBP18.44■□□□□ 0.54
PNKP-225ENST00000636214 ANKRD6Q9Y2G4 727 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 FNDC3AQ9Y2H6 1198 aaKnown RBP18.44■□□□□ 0.54
PNKP-225ENST00000636214 FARP1Q9Y4F1 1045 aaPredicted RBP18.44■□□□□ 0.54
PNKP-225ENST00000636214 IGF2RP11717 2491 aa18.44■□□□□ 0.54
PNKP-225ENST00000636214 C1QTNF3-AMACRE9PGA6 284 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 FLRT2O43155 660 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 PROS1P07225 676 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 GOT1P17174 413 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 GABRB2P47870 512 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 CCT8P50990 548 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 GALCP54803 685 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 KIF19Q2TAC6 998 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 INAVAQ3KP66 663 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 SLC45A4Q5BKX6 768 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 CXorf57Q6NSI4 855 aaKnown RBP18.43■□□□□ 0.54
PNKP-225ENST00000636214 SASS6Q6UVJ0 657 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 CLEC17AQ6ZS10 378 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 ZNF677Q86XU0 584 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 XYLT1Q86Y38 959 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 CCDC114Q96M63 670 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 PCMTD1Q96MG8 357 aaPredicted RBP18.43■□□□□ 0.54
PNKP-225ENST00000636214 NPY6RQ99463 290 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 FEM1AQ9BSK4 669 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 C2orf49Q9BVC5 232 aaPredicted RBP18.43■□□□□ 0.54
PNKP-225ENST00000636214 VPS16Q9H269 839 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 IL21RQ9HBE5 538 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 AASDHPPTQ9NRN7 309 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms