RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 THRAP10827 490 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ATP6V1B1P15313 513 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 AKT2P31751 481 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ATXN1P54253 815 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NAGLUP54802 743 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 IL5RAQ01344 420 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ABCA11PQ4W5N1 156 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ZFP1Q6P2D0 407 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ZCCHC12Q6PEW1 402 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 UNC13DQ70J99 1090 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CEP68Q76N32 757 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SNX32Q86XE0 403 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 GLYCTKQ8IVS8 523 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 DHRSXQ8N5I4 330 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 FAM120BQ96EK7 910 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TRNT1Q96Q11 434 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CCDC28BQ9BUN5 200 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RETREG1Q9H6L5 497 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 C3orf14Q9HBI5 128 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SMURF1Q9HCE7 757 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SEC31BQ9NQW1 1179 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TMEM216Q9P0N5 145 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 UXTQ9UBK9 157 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 USP17L10C9JJH3 530 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 C2CD2LO14523 706 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 NCK1P16333 377 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 CCNCP24863 283 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ADSLP30566 484 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 VHLP40337 213 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ITIH4Q14624 930 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 AMER2Q8N7J2 671 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF548Q8NEK5 533 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 DQX1Q8TE96 717 aaKnown RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 USP33Q8TEY7 942 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ABHD5Q8WTS1 349 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PSMD13Q9UNM6 376 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 LAMC1P11047 1609 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PIK3C2GO75747 1445 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 FCHO1O14526 889 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 REM1O75628 298 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 AGTP01019 485 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 OR56A5P0C7T3 313 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ALOX12P18054 663 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PVALBP20472 110 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 GSTM2P28161 218 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PBLDP30039 288 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 MASP1P48740 699 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PPP3R1P63098 170 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 OTUD4Q01804 1114 aaKnown RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 NR1D2Q14995 579 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 MAPK14Q16539 360 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF792Q3KQV3 632 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 SPPL2AQ8TCT8 520 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 METTL21AQ8WXB1 218 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PIGKQ92643 395 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 MYDGFQ969H8 173 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PRMT6Q96LA8 375 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 NPAS2Q99743 824 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 C11orf70Q9BRQ4 267 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 XPNPEP3Q9NQH7 507 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF180Q9UJW8 692 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 VPS28Q9UK41 221 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 SLC27A6Q9Y2P4 619 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 MIA3Q5JRA6 1907 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 RPS6KA4O75676 772 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 GABBR2O75899 941 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PGLSO95336 258 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PAX7P23759 505 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 FASP25445 335 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 SLC1A2P43004 574 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 CDH11P55287 796 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 TTI2Q6NXR4 508 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ERO1BQ86YB8 467 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 MRPL41Q8IXM3 137 aaKnown RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 CYP4X1Q8N118 509 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 DEPDC4Q8N2C3 294 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 STK40Q8N2I9 435 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ATP6V1G3Q96LB4 118 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 SCGB3A2Q96PL1 93 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ASB2Q96Q27 587 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 CHST12Q9NRB3 414 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 FBXO9Q9UK97 447 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 NUP50Q9UKX7 468 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 DOCK8Q8NF50 2099 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 BORCS7-ASMTA0A0B4J1R7 106 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 GRK5P34947 590 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 SNRPFP62306 86 aaKnown RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ADAM8P78325 824 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 SYCE2Q6PIF2 218 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF709Q8N972 641 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 PNLDC1Q8NA58 520 aaKnown RBP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 BORCS7Q96B45 105 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 ZHX1-C8orf76Q96EF9 292 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 REEP1Q9H902 201 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCN1A-212ENST00000636194 COPS7AQ9UBW8 275 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 WASF3Q9UPY6 502 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 TEX13CA0A0J9YWL9 993 aa6.11□□□□□ -1.43
SCN1A-212ENST00000636194 GPR182O15218 404 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms