RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 DNAJB1P25685 340 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 MRPL58Q14197 206 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 TRIP4Q15650 581 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 DUSP6Q16828 381 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 BRMS1LQ5PSV4 323 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 UHMK1Q8TAS1 419 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 COMMD8Q9NX08 183 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 ARHGAP42A6NI28 874 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 COCHO43405 550 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZNF189O75820 626 aaPredicted RBP12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 ABLIM3O94929 683 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 CDH5P33151 784 aaPredicted RBP12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 MTA1Q13330 715 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 GRM2Q14416 872 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 GKAP1Q5VSY0 366 aaPredicted RBP12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 LRRC38Q5VT99 294 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 RELL1Q8IUW5 271 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 GLIS1Q8NBF1 620 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 KXD1Q9BQD3 176 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 PLCD4Q9BRC7 762 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 ATP13A1Q9HD20 1204 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 SNX10Q9Y5X0 201 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 WNT6Q9Y6F9 365 aa12.77□□□□□ -0.36
SYNGAP1-207ENST00000628646 NEMP1O14524 444 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 RBP3P10745 1247 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 CHN1P15882 459 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 CLCN4P51793 760 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 TFDP3Q5H9I0 405 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 TXNRD3NBQ6F5E7 133 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 MFSD7Q6UXD7 560 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 CD300LGQ6UXG3 332 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 EXOC3L1Q86VI1 746 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 PDIK1LQ8N165 341 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 NECTIN4Q96NY8 510 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 PAIP2Q9BPZ3 127 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 IRAK2O43187 625 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 ACSL4O60488 711 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 LRCH4O75427 683 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 ADH1CP00326 375 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 CREB1P16220 341 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 VIPR2P41587 438 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 OXCT1P55809 520 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 IZUMO3Q5VZ72 239 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 SPOCD1Q6ZMY3 1216 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 KDELC2Q7Z4H8 507 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 CCDC13Q8IYE1 715 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 DNAAF3Q8N9W5 541 aa12.77□□□□□ -0.37
SYNGAP1-207ENST00000628646 C3orf70A6NLC5 250 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 NFATC1O95644 943 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 AGTP01019 485 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 PRUNE1Q86TP1 453 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 HJURPQ8NCD3 748 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 BPIFB1Q8TDL5 484 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 ZMYM5Q9UJ78 669 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 LINC01565O15544 149 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 KCNN4O15554 427 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 STX2P32856 288 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 PTPN9P43378 593 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 LIG3P49916 1009 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 ARL4CP56559 192 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 PDK1Q15118 436 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 CDKL3Q8IVW4 592 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 ARFGAP1Q8N6T3 406 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 CELF5Q8N6W0 485 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 NETO2Q8NC67 525 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 TRMT61BQ9BVS5 477 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 PPCSQ9HAB8 311 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 TCEA3O75764 348 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 GOT1P17174 413 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 ITGA8P53708 1063 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 PITX1P78337 314 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 PIGWQ7Z7B1 504 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 CACUL1Q86Y37 369 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 CCDC185Q8N715 623 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 PIGVQ9NUD9 493 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 DNMT3BQ9UBC3 853 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 ZNF510Q9Y2H8 683 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 MICAL3Q7RTP6 2002 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 KCNU1A8MYU2 1149 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 PCK1P35558 622 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 STAT4Q14765 748 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 POLD3Q15054 466 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 STXBP5Q5T5C0 1151 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 CMTM8Q8IZV2 173 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 SEC16BQ96JE7 1060 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 ZYG11BQ9C0D3 744 aa12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 ZNF334Q9HCZ1 680 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 DNAJC17Q9NVM6 304 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-207ENST00000628646 FOXO6A8MYZ6 492 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 TACR2P21452 398 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 GCAP28676 217 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 AGAP3Q96P47 875 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 DYRK4Q9NR20 520 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms