RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 BRD8Q9H0E9 1235 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 DHX35Q9H5Z1 703 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 WDR6Q9NNW5 1121 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 PIH1D1Q9NWS0 290 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 TXNDC16Q9P2K2 825 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 NEU3Q9UQ49 428 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 TDRD15B5MCY1 1934 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 E2F8A0AVK6 867 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 GYG2O15488 501 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 RECQL4O94761 1208 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 SERPINA6P08185 405 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 SMIM10L2AP0DMW4 78 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 SMIM10L2BP0DMW5 78 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 ESRRAP11474 423 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 LMO2P25791 158 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 CPOXP36551 454 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 HARS2P49590 506 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 NKX3-2P78367 333 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 SOX4Q06945 474 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 BLMHQ13867 455 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 BMPR2Q13873 1038 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 SV2CQ496J9 727 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 GLRA4Q5JXX5 417 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 BEND5Q7L4P6 421 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 TMEM135Q86UB9 458 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 OSTM1Q86WC4 334 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 STKLD1Q8NE28 680 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 DTX3LQ8TDB6 740 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 DIS3LQ8TF46 1054 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 E2F7Q96AV8 911 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 THAP1Q9NVV9 213 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 PPARGC1AQ9UBK2 798 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 GREB1Q4ZG55 1949 aa7.35□□□□□ -1.23
CTNNA1-244ENST00000627109 TANC1Q9C0D5 1861 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 HHLA1C9JL84 531 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 MFSD11O43934 449 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 TMEM127O75204 238 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 PDGFRBP09619 1106 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 CCDC130P13994 396 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ADORA2BP29275 332 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ATXN1P54253 815 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 PACS1Q6VY07 963 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ATG14Q6ZNE5 492 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 CCDC117Q8IWD4 279 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 NETO2Q8NC67 525 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 CCNYQ8ND76 341 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 MIEF2Q96C03 454 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 MAGEB5Q9BZ81 275 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 NXF3Q9H4D5 531 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 CASS4Q9NQ75 786 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 DNAJC28Q9NX36 388 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 FAM50BQ9Y247 325 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 C2orf71A6NGG8 1288 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 FCHO1O14526 889 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 PROCP04070 461 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 MYL2P10916 166 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 GOT1P17174 413 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ATP6V1C1P21283 382 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 GNL1P36915 607 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 GRIA1P42261 906 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 TAF6P49848 677 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 PPIDQ08752 370 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 PCLAFQ15004 111 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 SNX17Q15036 470 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 SPANXN3Q5MJ09 141 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 TEDDM1Q5T9Z0 273 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 MROH9Q5TGP6 573 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 NECAB2Q7Z6G3 386 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ADGRG6Q86SQ4 1221 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 PDCD7Q8N8D1 485 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 B3GALNT2Q8NCR0 500 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 TMEM40Q8WWA1 233 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ATP6V1E2Q96A05 226 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 SORT1Q99523 831 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 LPIN3Q9BQK8 851 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 CSNK1G1Q9HCP0 422 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 DDX43Q9NXZ2 648 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 MFHAS1Q9Y4C4 1052 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 MYO16Q9Y6X6 1858 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 DNAH12Q6ZR08 3092 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ERI2A8K979 691 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 HCRTO43612 131 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 PLIN3O60664 434 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 GLRA3O75311 464 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 SMNDC1O75940 238 aaKnown RBP eCLIP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 IGLV3-25P01717 112 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 MYL4P12829 197 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 LCP1P13796 627 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ACLYP53396 1101 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 LILRA4P59901 499 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 SARNPP82979 210 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 PUS10Q3MIT2 529 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 KIAA0319Q5VV43 1072 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 HEATR6Q6AI08 1181 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ALKBH2Q6NS38 261 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 ZCCHC8Q6NZY4 707 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 RFWD3Q6PCD5 774 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 TREML1Q86YW5 311 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 EGFL6Q8IUX8 553 aa7.34□□□□□ -1.23
CTNNA1-244ENST00000627109 APLFQ8IW19 511 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms