RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, human

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC23A-215	ENST00000625395	GABRB3	P28472	473 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	STT3A	P46977	705 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	ME1	P48163	572 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	PRIM2	P49643	509 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	YPEL5	P62699	121 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	RAE1	P78406	368 aa	Known RBP	4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	TRIM71	Q2Q1W2	868 aa	Known RBP	4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	GLE1	Q53GS7	698 aa	Known RBP	4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	RRAGB	Q5VZM2	374 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	IRF2BP2	Q7Z5L9	587 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	OR52L2P	Q8NGH6	319 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	WIPF2	Q8TF74	440 aa	Predicted RBP	4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	PMM1	Q92871	262 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	PRR11	Q96HE9	360 aa	Predicted RBP	4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	FCRL5	Q96RD9	977 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	TM2D2	Q9BX73	214 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	AGO4	Q9HCK5	861 aa	Known RBP	4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	ERVK-5	Q9HDB9	667 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	POT1	Q9NUX5	634 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	TMEM184C	Q9NVA4	438 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	HACL1	Q9UJ83	578 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	HS3ST3B1	Q9Y662	390 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	RNF123	Q5XPI4	1314 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	PCDH11X	Q9BZA7	1347 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	PCDH11Y	Q9BZA8	1340 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	CASP8AP2	Q9UKL3	1982 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	CARMIL3	Q8ND23	1372 aa		4.38	□□□□□ -1.71
SEC23A-215	ENST00000625395	KIF13B	Q9NQT8	1826 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	UBR3	Q6ZT12	1888 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	C2CD4B	A6NLJ0	364 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	RRH	O14718	337 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	KPNA5	O15131	536 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	PPM1G	O15355	546 aa	Predicted RBP	4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	TULP3	O75386	442 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	PARN	O95453	639 aa	Known RBP	4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	IGHMBP2	P38935	993 aa	Known RBP	4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	TM4SF4	P48230	202 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	SEMA3B	Q13214	749 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	KPNB1	Q14974	876 aa	Known RBP	4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	MAPKAPK3	Q16644	382 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	COBLL1	Q53SF7	1204 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	ACSM6	Q6P461	480 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	RBM44	Q6ZP01	1051 aa	Known RBP	4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	FAM57B	Q71RH2	274 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	UEVLD	Q8IX04	471 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	CCDC33	Q8N5R6	958 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	PJA1	Q8NG27	643 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	NSMCE1	Q8WV22	266 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	LRRC46	Q96FV0	321 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	ZNF845	Q96IR2	970 aa	Predicted RBP	4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	WAC	Q9BTA9	647 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	NECTIN3	Q9NQS3	549 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	RNF186	Q9NXI6	227 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	CHPF2	Q9P2E5	772 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	HEY2	Q9UBP5	337 aa		4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.37	□□□□□ -1.71
SEC23A-215	ENST00000625395	C5	P01031	1676 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	ITSN1	Q15811	1721 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	C16orf96	A6NNT2	1141 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	TRIM38	O00635	465 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	HNRNPDL	O14979	420 aa	Known RBP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	ZSCAN9	O15535	394 aa	Predicted RBP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	TLX3	O43711	291 aa	Predicted RBP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	FGF18	O76093	207 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	VIP	P01282	170 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	SLC3A2	P08195	630 aa	Known RBP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	TFEB	P19484	476 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	HOXA7	P31268	230 aa	Predicted RBP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	CPA2	P48052	419 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	ZNF84	P51523	738 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	MTX1	Q13505	466 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	ARL13B	Q3SXY8	428 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	ZNF260	Q3ZCT1	412 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	LEXM	Q3ZCV2	418 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	TMEM196	Q5HYL7	178 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	KLHDC7A	Q5VTJ3	777 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	TBC1D9B	Q66K14	1250 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	CCDC144NL	Q6NUI1	221 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	ASB12	Q8WXK4	309 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	GJA10	Q969M2	543 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	COG3	Q96JB2	828 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	PAAF1	Q9BRP4	392 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	TUBB6	Q9BUF5	446 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	KRTAP1-5	Q9BYS1	174 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	PCDHAC1	Q9H158	963 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	TAOK3	Q9H2K8	898 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	NARF	Q9UHQ1	456 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	MAP2	P11137	1827 aa	Known RBP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	VIRMA	Q69YN4	1812 aa	Known RBP	4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	KDR	P35968	1356 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	CUL9	Q8IWT3	2517 aa		4.36	□□□□□ -1.71
SEC23A-215	ENST00000625395	DOT1L	Q8TEK3	1739 aa		4.35	□□□□□ -1.71
SEC23A-215	ENST00000625395	MKI67	P46013	3256 aa	Known RBP	4.35	□□□□□ -1.71
SEC23A-215	ENST00000625395	TAF1L	Q8IZX4	1826 aa		4.35	□□□□□ -1.71
SEC23A-215	ENST00000625395	GXYLT2	A0PJZ3	443 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms