RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 TRIM38O00635 465 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 FFAR2O15552 330 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 LATO43561 262 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 MAGEC1O60732 1142 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 LUC7L3O95232 432 aaKnown RBP15.18■□□□□ 0.02
PNKP-218ENST00000625299 F13A1P00488 732 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 LTFP02788 710 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 MYL1P05976 194 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 EPB41P11171 864 aaKnown RBP15.18■□□□□ 0.02
PNKP-218ENST00000625299 VDRP11473 427 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 VAV1P15498 845 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 TMPRSS3P57727 454 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 YWHAEP62258 255 aaKnown RBP15.18■□□□□ 0.02
PNKP-218ENST00000625299 E2F1Q01094 437 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 LRMPQ12912 555 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 STAT4Q14765 748 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 DCAF6Q58WW2 860 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 MS4A13Q5J8X5 152 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 TMC6Q7Z403 805 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 APCDD1Q8J025 514 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 PTPRN2Q92932 1015 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 FCRL2Q96LA5 508 aaPredicted RBP15.18■□□□□ 0.02
PNKP-218ENST00000625299 MYOCQ99972 504 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 MIS12Q9H081 205 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 CYTH4Q9UIA0 394 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 TPX2Q9ULW0 747 aaKnown RBP15.18■□□□□ 0.02
PNKP-218ENST00000625299 TDRD6O60522 2096 aaKnown RBP15.18■□□□□ 0.02
PNKP-218ENST00000625299 COL6A6A6NMZ7 2263 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 CYSRT1A8MQ03 144 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 C10orf142B7Z368 130 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 M0QYV0 167 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 RHOBTB3O94955 611 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 ZSCAN22P10073 491 aaPredicted RBP15.17■□□□□ 0.02
PNKP-218ENST00000625299 DRD3P35462 400 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 NNMTP40261 264 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 GABREP78334 506 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 DNM1Q05193 864 aaKnown RBP15.17■□□□□ 0.02
PNKP-218ENST00000625299 ELAVL3Q14576 367 aaKnown RBP15.17■□□□□ 0.02
PNKP-218ENST00000625299 CBWD6Q4V339 395 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 CBWD3Q5JTY5 395 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 CBWD5Q5RIA9 395 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 PMF1Q6P1K2 205 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 LGI2Q8N0V4 545 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 CACTIN-AS1Q8N1I8 211 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 SCML4Q8N228 414 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 IRGQQ8WZA9 623 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 AZIN2Q96A70 460 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 SERPINB11Q96P15 392 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 ARHGAP20Q9P2F6 1191 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 CFAP45Q9UL16 551 aa15.17■□□□□ 0.02
PNKP-218ENST00000625299 GABBR2O75899 941 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 NUCB2P80303 420 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 RHDQ02161 417 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 ZNF211Q13398 564 aaPredicted RBP15.16■□□□□ 0.02
PNKP-218ENST00000625299 LY6DQ14210 128 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 RAP1GAP2Q684P5 730 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 IQCHQ86VS3 1027 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 CHSY1Q86X52 802 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 GUF1Q8N442 669 aaKnown RBP15.16■□□□□ 0.02
PNKP-218ENST00000625299 DQX1Q8TE96 717 aaKnown RBP15.16■□□□□ 0.02
PNKP-218ENST00000625299 KCNE4Q8WWG9 221 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 TFAP2BQ92481 460 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 FAM149B1Q96BN6 582 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 ZNF578Q96N58 590 aaPredicted RBP15.16■□□□□ 0.02
PNKP-218ENST00000625299 SPAG5Q96R06 1193 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 SEMA4CQ9C0C4 833 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 UCKL1Q9NWZ5 548 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 TJP2Q9UDY2 1190 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 USP25Q9UHP3 1055 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 XPO7Q9UIA9 1087 aaKnown RBP15.16■□□□□ 0.02
PNKP-218ENST00000625299 DMTF1Q9Y222 760 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 TLR6Q9Y2C9 796 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 MYO18BQ8IUG5 2567 aa15.16■□□□□ 0.02
PNKP-218ENST00000625299 CETN3O15182 167 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 KLK10O43240 276 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 PLRG1O43660 514 aaKnown RBP15.15■□□□□ 0.02
PNKP-218ENST00000625299 USP12O75317 370 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 APOEP02649 317 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 MYF5P13349 255 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 PDGFRAP16234 1089 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 UCNP55089 124 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 CNTN1Q12860 1018 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 OVGP1Q12889 678 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 PKDCCQ504Y2 493 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 ZCWPW2Q504Y3 356 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 SETMARQ53H47 684 aaPredicted RBP15.15■□□□□ 0.02
PNKP-218ENST00000625299 TMEM270Q6UE05 265 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 LCLAT1Q6UWP7 414 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 CIR1Q86X95 450 aaPredicted RBP15.15■□□□□ 0.02
PNKP-218ENST00000625299 SMYD4Q8IYR2 804 aaPredicted RBP15.15■□□□□ 0.02
PNKP-218ENST00000625299 SLC25A45Q8N413 288 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 FAM181AQ8N9Y4 354 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 OR8D1Q8WZ84 308 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 KLHDC7BQ96G42 594 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 DEPDC7Q96QD5 511 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.15■□□□□ 0.02
PNKP-218ENST00000625299 OSBPL2Q9H1P3 480 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 NAALADL1Q9UQQ1 740 aa15.15■□□□□ 0.02
PNKP-218ENST00000625299 A0A1B0GVM2 712 aa15.14■□□□□ 0.01
PNKP-218ENST00000625299 PRAMEF26H0Y7S4 382 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms