RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 GDF3Q9NR23 364 aa19.59■□□□□ 0.73
SMN1-211ENST00000625245 CTNND2Q9UQB3 1225 aa19.59■□□□□ 0.73
SMN1-211ENST00000625245 ITPR1Q14643 2758 aa19.59■□□□□ 0.73
SMN1-211ENST00000625245 DOCK9Q9BZ29 2069 aa19.58■□□□□ 0.73
SMN1-211ENST00000625245 ITIH6Q6UXX5 1313 aa19.58■□□□□ 0.73
SMN1-211ENST00000625245 ASXL3Q9C0F0 2248 aa19.58■□□□□ 0.73
SMN1-211ENST00000625245 SYNJ2BP-COX16A0A087WUM0 186 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3DA0A087WVF3 549 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3IA0A087WXS9 549 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3EA0A087X179 549 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3KA0A087X1G2 549 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3FA6NER0 549 aaPredicted RBP19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3LB9A6J9 549 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 E5RJQ4 531 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 F5H5T6 163 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 MED7O43513 233 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 ADH1BP00325 375 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3HP0C7X1 549 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 VAV1P15498 845 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 PDGFRAP16234 1089 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 ADPRHP54922 357 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 STX17P56962 302 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 DNAJC3Q13217 504 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 SLC45A4Q5BKX6 768 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3GQ6DHY5 549 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3CQ6IPX1 549 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 BEND5Q7L4P6 421 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 TBC1D3Q8IZP1 549 aaPredicted RBP19.58■□□□□ 0.72
SMN1-211ENST00000625245 EID2Q8N6I1 236 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 ATP6V0D2Q8N8Y2 350 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 MED15Q96RN5 788 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 POPDC2Q9HBU9 364 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 SCUBE2Q9NQ36 999 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 COX16Q9P0S2 106 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 SLC12A6Q9UHW9 1150 aa19.58■□□□□ 0.72
SMN1-211ENST00000625245 A0A1W2PR77 199 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 BICDL2A1A5D9 508 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 PPP1R3GB7ZBB8 358 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 PLK4O00444 970 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 THAP12O43422 761 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 AFPP02771 609 aaKnown RBP19.57■□□□□ 0.72
SMN1-211ENST00000625245 JUPP14923 745 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 MZF1P28698 734 aaPredicted RBP19.57■□□□□ 0.72
SMN1-211ENST00000625245 CLDN6P56747 220 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 YWHAZP63104 245 aaKnown RBP19.57■□□□□ 0.72
SMN1-211ENST00000625245 PITX1P78337 314 aaPredicted RBP19.57■□□□□ 0.72
SMN1-211ENST00000625245 SHBQ15464 509 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 TMPRSS12Q86WS5 348 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 CIR1Q86X95 450 aaPredicted RBP19.57■□□□□ 0.72
SMN1-211ENST00000625245 CCAR2Q8N163 923 aaKnown RBP19.57■□□□□ 0.72
SMN1-211ENST00000625245 SAP25Q8TEE9 199 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 ZNF606Q8WXB4 792 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 RNF34Q969K3 372 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 DCBLD2Q96PD2 775 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 THAP9Q9H5L6 903 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 FAM204AQ9H8W3 233 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 CYTH4Q9UIA0 394 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 CNTN6Q9UQ52 1028 aa19.57■□□□□ 0.72
SMN1-211ENST00000625245 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.57■□□□□ 0.72
SMN1-211ENST00000625245 COL5A1P20908 1838 aaPredicted RBP19.56■□□□□ 0.72
SMN1-211ENST00000625245 KCNU1A8MYU2 1149 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 TLR4O00206 839 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 BIN1O00499 593 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 GNA15P30679 374 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 ARRB1P49407 418 aaPredicted RBP19.56■□□□□ 0.72
SMN1-211ENST00000625245 PPP2CBP62714 309 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 PPP2CAP67775 309 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 SLC12A1Q13621 1099 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 ELAVL3Q14576 367 aaKnown RBP19.56■□□□□ 0.72
SMN1-211ENST00000625245 TAF5Q15542 800 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 ACCSLQ4AC99 568 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 TMEM110Q86TL2 294 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 PRPF39Q86UA1 669 aaKnown RBP19.56■□□□□ 0.72
SMN1-211ENST00000625245 TRIM59Q8IWR1 403 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 STK32AQ8WU08 396 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 ACP6Q9NPH0 428 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMN1-211ENST00000625245 MYLKQ15746 1914 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 CELSR3Q9NYQ7 3312 aa19.56■□□□□ 0.72
SMN1-211ENST00000625245 YKT6O15498 198 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 RFPL3O75679 317 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 GNA14O95837 355 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 IGLV3-25P01717 112 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 BMP6P22004 513 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 MAT2AP31153 395 aaKnown RBP19.55■□□□□ 0.72
SMN1-211ENST00000625245 USP8P40818 1118 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 CDK17Q00537 523 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 SULT2A1Q06520 285 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 BNIP3Q12983 259 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 RABGAP1LQ5R372 815 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 SRRTQ9BXP5 876 aaKnown RBP19.55■□□□□ 0.72
SMN1-211ENST00000625245 PCDHGA1Q9Y5H4 931 aa19.55■□□□□ 0.72
SMN1-211ENST00000625245 RTN2O75298 545 aa19.54■□□□□ 0.72
SMN1-211ENST00000625245 SLC2A3P11169 496 aa19.54■□□□□ 0.72
SMN1-211ENST00000625245 EPHA8P29322 1005 aaPredicted RBP19.54■□□□□ 0.72
SMN1-211ENST00000625245 DRD3P35462 400 aa19.54■□□□□ 0.72
SMN1-211ENST00000625245 HNF1BP35680 557 aa19.54■□□□□ 0.72
SMN1-211ENST00000625245 METAP1P53582 386 aa19.54■□□□□ 0.72
SMN1-211ENST00000625245 NXPH1P58417 271 aa19.54■□□□□ 0.72
SMN1-211ENST00000625245 POM121L1PQ3SYA9 428 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms