RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 DUSP23Q9BVJ7 150 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 STK17AQ9UEE5 414 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 SLCO3A1Q9UIG8 710 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 ERVW-1Q9UQF0 538 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 PCDHGA7Q9Y5G6 932 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 UBE4BO95155 1302 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 EDDM13A0A1B0GTR0 161 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 NEMP2A6NFY4 417 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 CLIC2O15247 247 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 PLRG1O43660 514 aaKnown RBP14.39□□□□□ -0.11
SNX1-214ENST00000625244 STX6O43752 255 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 TCEA3O75764 348 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 VNN1O95497 513 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 ASLP04424 464 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 CASRP41180 1078 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 YWHAGP61981 247 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNX1-214ENST00000625244 NCAPHQ15003 741 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 SETMARQ53H47 684 aaPredicted RBP14.39□□□□□ -0.11
SNX1-214ENST00000625244 PERM1Q5SV97 790 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 RFWD3Q6PCD5 774 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 JAMLQ86YT9 394 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 KDM1BQ8NB78 822 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 OR13H1Q8NG92 308 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 PTPRN2Q92932 1015 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 CALN1Q9BXU9 219 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 DUSP16Q9BY84 665 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 KDM4CQ9H3R0 1056 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 AGPAT3Q9NRZ7 376 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 ACSL6Q9UKU0 697 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 PLAAQ9Y263 795 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 OTOGQ6ZRI0 2925 aa14.39□□□□□ -0.11
SNX1-214ENST00000625244 ZFC3H1O60293 1989 aaKnown RBP14.38□□□□□ -0.11
SNX1-214ENST00000625244 GOLGA6L7A0A1B0GV03 622 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 EME2A4GXA9 379 aaPredicted RBP14.38□□□□□ -0.11
SNX1-214ENST00000625244 SLC31A1O15431 190 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 TGFB1I1O43294 461 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 VAV1P15498 845 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 PRLRP16471 622 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 MANEAQ5SRI9 462 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 MPP7Q5T2T1 576 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 PIK3R6Q5UE93 754 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 ZCCHC8Q6NZY4 707 aaKnown RBP14.38□□□□□ -0.11
SNX1-214ENST00000625244 MMS22LQ6ZRQ5 1243 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 MFN1Q8IWA4 741 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 SLC22A18ASQ8N1D0 253 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 ARHGAP18Q8N392 663 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 TPCN2Q8NHX9 752 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 NDRG1Q92597 394 aaKnown RBP14.38□□□□□ -0.11
SNX1-214ENST00000625244 KLK6Q92876 244 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 ZSCAN31Q96LW9 406 aaPredicted RBP14.38□□□□□ -0.11
SNX1-214ENST00000625244 NOX5Q96PH1 765 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 STIM2Q9P246 746 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 SFMBT1Q9UHJ3 866 aa14.38□□□□□ -0.11
SNX1-214ENST00000625244 SETD2Q9BYW2 2564 aaPredicted RBP14.38□□□□□ -0.11
SNX1-214ENST00000625244 RP1L1Q8IWN7 2480 aaPredicted RBP14.38□□□□□ -0.11
SNX1-214ENST00000625244 PLD2O14939 933 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 SLC7A4O43246 635 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 C4BPAP04003 597 aaKnown RBP14.37□□□□□ -0.11
SNX1-214ENST00000625244 SRPRAP08240 638 aaKnown RBP14.37□□□□□ -0.11
SNX1-214ENST00000625244 SLFN14P0C7P3 912 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 LIPCP11150 499 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 P4HA1P13674 534 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 POU3F2P20265 443 aaPredicted RBP14.37□□□□□ -0.11
SNX1-214ENST00000625244 SLC6A4P31645 630 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 UGT1A5P35504 534 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 ASPAP45381 313 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 MORC3Q14149 939 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 PPP1R26Q5T8A7 1209 aaPredicted RBP14.37□□□□□ -0.11
SNX1-214ENST00000625244 AGBL4Q5VU57 503 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 RRAGBQ5VZM2 374 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 SPOPLQ6IQ16 392 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 FBXO39Q8N4B4 442 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 XXYLT1Q8NBI6 393 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 ZNF548Q8NEK5 533 aaPredicted RBP14.37□□□□□ -0.11
SNX1-214ENST00000625244 FIBINQ8TAL6 211 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 RPL10LQ96L21 214 aaKnown RBP14.37□□□□□ -0.11
SNX1-214ENST00000625244 ADNPQ9H2P0 1102 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 FZD3Q9NPG1 666 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 DNAJC28Q9NX36 388 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 SARDHQ9UL12 918 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 HBS1LQ9Y450 684 aaKnown RBP14.37□□□□□ -0.11
SNX1-214ENST00000625244 ITIH6Q6UXX5 1313 aa14.37□□□□□ -0.11
SNX1-214ENST00000625244 MUSKO15146 869 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 MSI1O43347 362 aaKnown RBP14.36□□□□□ -0.11
SNX1-214ENST00000625244 RNGTTO60942 597 aaKnown RBP14.36□□□□□ -0.11
SNX1-214ENST00000625244 LATS1O95835 1130 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 HGFP14210 728 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 CLDN2P57739 230 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 CNTN1Q12860 1018 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 ELAVL3Q14576 367 aaKnown RBP14.36□□□□□ -0.11
SNX1-214ENST00000625244 KMT5BQ4FZB7 885 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 FAM133BQ5BKY9 247 aaKnown RBP14.36□□□□□ -0.11
SNX1-214ENST00000625244 FSCBQ5H9T9 825 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 PITRM1Q5JRX3 1037 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 BHLHA9Q7RTU4 235 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 B3GNT8Q7Z7M8 397 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 ZSCAN1Q8NBB4 408 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 MYEOVQ96EZ4 313 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 IFT43Q96FT9 208 aa14.36□□□□□ -0.11
SNX1-214ENST00000625244 CCDC39Q9UFE4 941 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms