RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 TMEM248Q9NWD8 314 aa16.74■□□□□ 0.27
LDB3-208ENST00000623007 MOCS1Q9NZB8 636 aa16.74■□□□□ 0.27
LDB3-208ENST00000623007 NEU3Q9UQ49 428 aa16.74■□□□□ 0.27
LDB3-208ENST00000623007 SLC38A8A6NNN8 435 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 KCNK1O00180 336 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 AVILO75366 819 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 VIMP08670 466 aaKnown RBP16.73■□□□□ 0.27
LDB3-208ENST00000623007 CCNB1P14635 433 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 KRT4P19013 534 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 CA4P22748 312 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 GJA8P48165 433 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 MAPKAPK2P49137 400 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 MNX1P50219 401 aaPredicted RBP16.73■□□□□ 0.27
LDB3-208ENST00000623007 GATMP50440 423 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 RENBPP51606 427 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 GEMP55040 296 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 YBEYP58557 167 aaPredicted RBP16.73■□□□□ 0.27
LDB3-208ENST00000623007 DUSP4Q13115 394 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 ITIH4Q14624 930 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 VEPH1Q14D04 833 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 C10orf120Q5SQS8 335 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 KCTD11Q693B1 232 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 IGDCC3Q8IVU1 814 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 CTAGE3PQ8IX95 158 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 PTCD2Q8WV60 388 aaKnown RBP16.73■□□□□ 0.27
LDB3-208ENST00000623007 DPF3Q92784 378 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 AZIN2Q96A70 460 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 FCRL5Q96RD9 977 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 IL12RB2Q99665 862 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 HERC2P3Q9BVR0 1158 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 C11orf49Q9H6J7 331 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 CWH43Q9H720 699 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 CASS4Q9NQ75 786 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 MKS1Q9NXB0 559 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 NSMCE4AQ9NXX6 385 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 UXTQ9UBK9 157 aaPredicted RBP16.73■□□□□ 0.27
LDB3-208ENST00000623007 DNMT3LQ9UJW3 386 aa16.73■□□□□ 0.27
LDB3-208ENST00000623007 LTBP2Q14767 1821 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 MSI1O43347 362 aaKnown RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 TYROBPO43914 113 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 DRD4P21917 467 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 ATP5C1P36542 298 aaKnown RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 DSG1Q02413 1049 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 EFEMP1Q12805 493 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 CDH17Q12864 832 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 HNRNPDQ14103 355 aaKnown RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 CASC4Q6P4E1 433 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 MARK2Q7KZI7 788 aaKnown RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 TMEM199Q8N511 208 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 ANKRD42Q8N9B4 389 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 ACMSDQ8TDX5 336 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 ZNF689Q96CS4 500 aaPredicted RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 TRMT2BQ96GJ1 504 aaKnown RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 CABS1Q96KC9 395 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 PRDM5Q9NQX1 630 aaPredicted RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 OSER1Q9NX31 292 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 ATP11BQ9Y2G3 1177 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 SCN5AQ14524 2016 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 DFFAO00273 331 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 ZBTB24O43167 697 aaPredicted RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 ASMTLO95671 621 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 TIMP1P01033 207 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 USP46P62068 366 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 ILF2Q12905 390 aaKnown RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 PLD1Q13393 1074 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 PARP15Q460N3 678 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 MS4A13Q5J8X5 152 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 SPOUT1Q5T280 376 aaKnown RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 HHATQ5VTY9 493 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 TIFABQ6ZNK6 161 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 ARHGAP12Q8IWW6 846 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 PPM1NQ8N819 430 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 DNAAF3Q8N9W5 541 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 CCDC197Q8NCU1 140 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 GABPB2Q8TAK5 448 aaPredicted RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 DENND1AQ8TEH3 1009 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 MZB1Q8WU39 189 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 DEPDC1BQ8WUY9 529 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 PLD4Q96BZ4 506 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 MYRFLQ96LU7 910 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 DDX50Q9BQ39 737 aaKnown RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 IQCGQ9H095 443 aaKnown RBP16.72■□□□□ 0.27
LDB3-208ENST00000623007 ENTPD7Q9NQZ7 604 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 TXNDC16Q9P2K2 825 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 VANGL2Q9ULK5 521 aa16.72■□□□□ 0.27
LDB3-208ENST00000623007 FAM237BA0A1B0GVD1 139 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 WDR27A2RRH5 827 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 DRGXA6NNA5 263 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 TLR5O60602 858 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 MAFKO60675 156 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 USP1O94782 785 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 ABLIM3O94929 683 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 ALDH1A3P47895 512 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 GPR15P49685 360 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 SLC18A2Q05940 514 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 TNK2Q07912 1038 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 MGAT5Q09328 741 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 TCTN1Q2MV58 587 aa16.71■□□□□ 0.27
LDB3-208ENST00000623007 DDX53Q86TM3 631 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms