RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 OR1E1P30953 314 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 ARHGAP25P42331 645 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 IL12RB1P42701 662 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 CTSOP43234 321 aaPredicted RBP14.71□□□□□ -0.05
CBWD3-217ENST00000621474 VAV2P52735 878 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 ZNF177Q13360 481 aaPredicted RBP14.71□□□□□ -0.05
CBWD3-217ENST00000621474 ZNF234Q14588 700 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 ANGPT1Q15389 498 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 ATP13A4Q4VNC1 1196 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 TSSK4Q6SA08 328 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 TMEM92Q6UXU6 159 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 SETD3Q86TU7 594 aaPredicted RBP14.71□□□□□ -0.05
CBWD3-217ENST00000621474 MRGPRX3Q96LB0 322 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 NCAPGQ9BPX3 1015 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 FEM1AQ9BSK4 669 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 GOLPH3Q9H4A6 298 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 CACNA2D2Q9NY47 1150 aa14.71□□□□□ -0.05
CBWD3-217ENST00000621474 A0A1W2PQF6 199 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 RHOQP17081 205 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 GOT1P17174 413 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 COL9A1P20849 921 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 EPHB2P29323 1055 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 CXCL12P48061 93 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 CCR3P51677 355 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 ARSEP51690 589 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 SLC12A1Q13621 1099 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 DMC1Q14565 340 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 CRY1Q16526 586 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 HSF5Q4G112 596 aaPredicted RBP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 BOLA3Q53S33 107 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 RWDD4Q6NW29 188 aaKnown RBP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 CCDC26Q8TAB7 109 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 FAM71BQ8TC56 605 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 TEKT4Q8WW24 435 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 ACDQ96AP0 544 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 PSMB7Q99436 277 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 GABRG3Q99928 467 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 TMEM245Q9H330 911 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 NOL6Q9H6R4 1146 aaKnown RBP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 TMEM110-MUSTN1A8MSY1 372 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 BTNL10A8MVZ5 291 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 WASH4PA8MWX3 477 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 ARHGAP6O43182 974 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 LAMTOR5O43504 91 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 TIMM44O43615 452 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 BUB1BO60566 1050 aaPredicted RBP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 ATG13O75143 517 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 DLDP09622 509 aaKnown RBP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 NTSR1P30989 418 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 WASP42768 502 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 DMWDQ09019 674 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 PPP6R3Q5H9R7 873 aaPredicted RBP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 RNF219Q5W0B1 726 aaPredicted RBP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 KIAA1211LQ6NV74 962 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 CHPFQ8IZ52 775 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 RTL3Q8N8U3 475 aaKnown RBP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 CCDC112Q8NEF3 446 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 TSC1Q92574 1164 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 HSPH1Q92598 858 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 NELL1Q92832 810 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 EPAS1Q99814 870 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 CWC15Q9P013 229 aaKnown RBP14.7□□□□□ -0.06
CBWD3-217ENST00000621474 TRIM10Q9UDY6 481 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 RAPGEFL1Q9UHV5 662 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 DNAI1Q9UI46 699 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 LCMT1Q9UIC8 334 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 HYOU1Q9Y4L1 999 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 ADGRG1Q9Y653 693 aa14.7□□□□□ -0.06
CBWD3-217ENST00000621474 IPO7O95373 1038 aaKnown RBP14.69□□□□□ -0.06
CBWD3-217ENST00000621474 RHOCP08134 193 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 CD48P09326 243 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 POLR2EP19388 210 aaKnown RBP14.69□□□□□ -0.06
CBWD3-217ENST00000621474 IL4RP24394 825 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 PRKCHP24723 683 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 MAPKAPK2P49137 400 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 TPI1P60174 286 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 KRT83P78385 493 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 DPYSQ14117 519 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 C6orf118Q5T5N4 469 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 RFX8Q6ZV50 586 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 POLNQ7Z5Q5 900 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 CCDC117Q8IWD4 279 aaPredicted RBP14.69□□□□□ -0.06
CBWD3-217ENST00000621474 OR7D4Q8NG98 312 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 TPCN2Q8NHX9 752 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 HHIPQ96QV1 700 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 KLC2Q9H0B6 622 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 RETREG1Q9H6L5 497 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 PCDH18Q9HCL0 1135 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 LUC7LQ9NQ29 371 aaKnown RBP14.69□□□□□ -0.06
CBWD3-217ENST00000621474 FBXO4Q9UKT5 387 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 RAD54BQ9Y620 910 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 STON1Q9Y6Q2 735 aa14.69□□□□□ -0.06
CBWD3-217ENST00000621474 ILVBLA1L0T0 632 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 H0Y858 1186 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 EEF2KO00418 725 aaKnown RBP14.68□□□□□ -0.06
CBWD3-217ENST00000621474 BUB1O43683 1085 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 SNAP91O60641 907 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 SP9P0CG40 484 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 HLA-EP13747 358 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms