RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 ZC3H18Q86VM9 953 aaKnown RBP12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 C12orf76Q8N812 135 aaPredicted RBP12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 NAT8LQ8N9F0 302 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 FAM71DQ8N9W8 422 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 CPT1BQ92523 772 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 PRCCQ92733 491 aaPredicted RBP12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 SLC39A13Q96H72 371 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 KLHL5Q96PQ7 755 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 QKIQ96PU8 341 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 PHACTR1Q9C0D0 580 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 POMKQ9H5K3 350 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 MRPL17Q9NRX2 175 aaKnown RBP12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 DZANK1Q9NVP4 752 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 TMEM51Q9NW97 253 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 COX16Q9P0S2 106 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 KLHL42Q9P2K6 505 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 GREB1Q4ZG55 1949 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 KCNU1A8MYU2 1149 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 RIPK2O43353 540 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 MFSD11O43934 449 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 SOAT2O75908 522 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 ABLIM3O94929 683 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 IFNB1P01574 187 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 ATF6P18850 670 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 RBL1P28749 1068 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 MAGEA6P43360 314 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 CLCN4P51793 760 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 PPP2R5DQ14738 602 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 PSMD5Q16401 504 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 SLC45A4Q5BKX6 768 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 TTMPQ5BVD1 217 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 RARS2Q5T160 578 aaKnown RBP12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 BTBD8Q5XKL5 378 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 TRMT10CQ7L0Y3 403 aaKnown RBP12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 HOOK3Q86VS8 718 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 ARMC2Q8NEN0 867 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 RSAD2Q8WXG1 361 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 ARL8AQ96BM9 186 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 DMRTB1Q96MA1 342 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 PWWP2AQ96N64 755 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 NECTIN4Q96NY8 510 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 KCNK17Q96T54 332 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 EMILIN2Q9BXX0 1053 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 TKTL2Q9H0I9 626 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 CDC42EP4Q9H3Q1 356 aaKnown RBP12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 WDCPQ9H6R7 721 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 CLIC5Q9NZA1 410 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 GMIPQ9P107 970 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 HEY1Q9Y5J3 304 aa12.77□□□□□ -0.36
TNFAIP3-211ENST00000621150 MYO16Q9Y6X6 1858 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 HACD1B0YJ81 288 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 C2CD2LO14523 706 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 NDC80O14777 642 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 OPA1O60313 960 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 RNF40O75150 1001 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 JUNDP17535 347 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 ZXDAP98168 799 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 NRG1Q02297 640 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 DUSP4Q13115 394 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 PRKD1Q15139 912 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 ARL13BQ3SXY8 428 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 ANKRD22Q5VYY1 191 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 DARS2Q6PI48 645 aaKnown RBP12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 TRIM67Q6ZTA4 783 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 B4GALNT4Q76KP1 1039 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 GPR65Q8IYL9 337 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 ARHGAP18Q8N392 663 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 OR2W6PQ8NHA6 318 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 UBLCP1Q8WVY7 318 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 ZBTB9Q96C00 473 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 FAM122AQ96E09 287 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 HAPLN3Q96S86 360 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 ARHGAP9Q9BRR9 750 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 TMEM109Q9BVC6 243 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 LRRC4CQ9HCJ2 640 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 AFF4Q9UHB7 1163 aaKnown RBP12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 SFMBT1Q9UHJ3 866 aa12.77□□□□□ -0.37
TNFAIP3-211ENST00000621150 GOLGA8KD6RF30 607 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 H7C0C1 242 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 EEF2KO00418 725 aaKnown RBP12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 GCATO75600 419 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 TMEM63AO94886 807 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 LRIG2O94898 1065 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 MAP3K6O95382 1288 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 URODP06132 367 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 VAV1P15498 845 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 ERCC2P18074 760 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 YWHAQP27348 245 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 MTHFRP42898 656 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 ATP5OP48047 213 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 ARPP19P56211 112 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 KCNJ11Q14654 390 aa12.76□□□□□ -0.37
TNFAIP3-211ENST00000621150 MGAT5BQ3V5L5 792 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms