RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 LUZP2Q86TE4 346 aa11.59□□□□□ -0.55
CLIP1-219ENST00000620786 STK40Q8N2I9 435 aa11.59□□□□□ -0.55
CLIP1-219ENST00000620786 MLPHQ9BV36 600 aaPredicted RBP11.59□□□□□ -0.55
CLIP1-219ENST00000620786 ZYG11BQ9C0D3 744 aa11.59□□□□□ -0.55
CLIP1-219ENST00000620786 TMEM245Q9H330 911 aa11.59□□□□□ -0.55
CLIP1-219ENST00000620786 MID1IP1Q9NPA3 183 aa11.59□□□□□ -0.55
CLIP1-219ENST00000620786 STK39Q9UEW8 545 aa11.59□□□□□ -0.55
CLIP1-219ENST00000620786 CCL16O15467 120 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 ZNF862O60290 1169 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 DEAF1O75398 565 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CNPP09543 421 aaKnown RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 ATP6V1C1P21283 382 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 DGKAP23743 735 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CDC25CP30307 473 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 ELK3P41970 407 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 SKIV2L2P42285 1042 aaKnown RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 AQP5P55064 265 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 MMRN1Q13201 1228 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 FAM110CQ1W6H9 321 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 FAM46CQ5VWP2 391 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 VAT1Q99536 393 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 BRD9Q9H8M2 597 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 ARL15Q9NXU5 204 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 ENTPD4Q9Y227 616 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 ANKDD1BA6NHY2 528 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 MT-CO1P00395 513 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 EIF2S1P05198 315 aaKnown RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 ATP6V1B2P21281 511 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 HPCAL1P37235 193 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 LRRC23Q53EV4 343 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 N4BP2L1Q5TBK1 243 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CHPFQ8IZ52 775 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CYP4X1Q8N118 509 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CPA6Q8N4T0 437 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 FBXO22Q8NEZ5 403 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 APBB2Q92870 758 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CDHR5Q9HBB8 845 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 KCNMB3Q9NPA1 279 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 FAM105AQ9NUU6 356 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CAB39Q9Y376 341 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 IFNA16P05015 189 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 HTR1BP28222 390 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 GABRR2P28476 465 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 GLUD2P49448 558 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 GPR15P49685 360 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 SPIDRQ14159 915 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 TARBP2Q15633 366 aaKnown RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CCDC153Q494R4 210 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 PAGE2BQ5JRK9 111 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 ZNF544Q6NX49 715 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 MAB21L3Q8N8X9 362 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 FNDC5Q8NAU1 212 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 TM6SF2Q9BZW4 377 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CERS4Q9HA82 394 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 GNPTGQ9UJJ9 305 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 RPTORQ8N122 1335 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 SMIM22K7EJ46 135 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CES2O00748 559 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 UBDO15205 165 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CLTBP09497 229 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CYP2C18P33260 490 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 GP5P40197 560 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 ABL2P42684 1182 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 PPIGQ13427 754 aaKnown RBP eCLIP11.58□□□□□ -0.562e-7■□□□□ 8.5
CLIP1-219ENST00000620786 C15orf59Q2T9L4 293 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 BNC2Q6ZN30 1099 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 NAT16Q8N8M0 369 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 MTMR9Q96QG7 549 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 PRRG3Q9BZD7 231 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 SLC24A2Q9UI40 661 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 DNTTP04053 509 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 CCR4P51679 360 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 C16orf72Q14CZ0 275 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 KCNA10Q16322 511 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 MFSD7Q6UXD7 560 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 TTC7BQ86TV6 843 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 POMGNT2Q8NAT1 580 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 SLC35C1Q96A29 364 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 THAP11Q96EK4 314 aa11.58□□□□□ -0.56
CLIP1-219ENST00000620786 FAM126AQ9BYI3 521 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-219ENST00000620786 NEDD8-MDP1E9PL57 170 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 MEIS2O14770 477 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 GRK2P25098 689 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 CDKAL1Q5VV42 579 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 LRRC34Q8IZ02 419 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 CYP4Z2PQ8N1L4 340 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 IL31RAQ8NI17 732 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 CATSPER2Q96P56 530 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 MYOCQ99972 504 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 TTPALQ9BTX7 342 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 BPIFA1Q9NP55 256 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 BLOC1S4Q9NUP1 217 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 ZNF510Q9Y2H8 683 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 A0A087X1B8 175 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 B4GALT5O43286 388 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 ADRB2P07550 413 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 MAPK8P45983 427 aa11.57□□□□□ -0.56
CLIP1-219ENST00000620786 CCT8P50990 548 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms