RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 C22orf31O95567 290 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 CRABP2P29373 138 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 TKTP29401 623 aaKnown RBP16.4■□□□□ 0.22
DKC1-213ENST00000620277 GNL1P36915 607 aaPredicted RBP16.4■□□□□ 0.22
DKC1-213ENST00000620277 ALDH1A3P47895 512 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 CXCR3P49682 368 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 KYAT3Q6YP21 454 aaKnown RBP16.4■□□□□ 0.22
DKC1-213ENST00000620277 MARK2Q7KZI7 788 aaKnown RBP16.4■□□□□ 0.22
DKC1-213ENST00000620277 KCTD4Q8WVF5 259 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 CMTM5Q96DZ9 223 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 ZNF670Q9BS34 389 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 NUDT5Q9UKK9 219 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.4■□□□□ 0.22
DKC1-213ENST00000620277 SPTLC1O15269 473 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 ZBTB24O43167 697 aaPredicted RBP16.4■□□□□ 0.22
DKC1-213ENST00000620277 HBP1O60381 514 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 GCATO75600 419 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 PYGLP06737 847 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 GSTA2P09210 222 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 FLOT2Q14254 428 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 POU6F1Q14863 301 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 PAN2Q504Q3 1202 aaKnown RBP16.4■□□□□ 0.22
DKC1-213ENST00000620277 PITRM1Q5JRX3 1037 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 PIGZQ86VD9 579 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 MFN1Q8IWA4 741 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 SPATA22Q8NHS9 363 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 RNF139Q8WU17 664 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 CENPKQ9BS16 269 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 PCDHAC1Q9H158 963 aa16.4■□□□□ 0.22
DKC1-213ENST00000620277 LIN28AQ9H9Z2 209 aaKnown RBP16.4■□□□□ 0.22
DKC1-213ENST00000620277 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.4■□□□□ 0.222e-16■□□□□ 10
DKC1-213ENST00000620277 UQCRBP14927 111 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 MX2P20592 715 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 CDK7P50613 346 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 MAP3K7CLP57077 242 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 MS4A2Q01362 244 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 GRM1Q13255 1194 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 RBM44Q6ZP01 1051 aaKnown RBP16.39■□□□□ 0.22
DKC1-213ENST00000620277 BHLHE22Q8NFJ8 381 aaPredicted RBP16.39■□□□□ 0.22
DKC1-213ENST00000620277 LRGUKQ96M69 825 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 SNX25Q9H3E2 840 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 IL1RL2Q9HB29 575 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 DCDC2Q9UHG0 476 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 ARHGAP26Q9UNA1 814 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 CSADQ9Y600 493 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 TLL2Q9Y6L7 1015 aa16.39■□□□□ 0.22
DKC1-213ENST00000620277 C15orf38-AP3S2A0A0A6YYH1 394 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 ATP6AP2A0A1C7CYW4 349 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 ATP6AP2O75787 350 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 JCHAINP01591 159 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 LGALS2P05162 132 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 ZNF280AP59817 542 aaPredicted RBP16.39■□□□□ 0.21
DKC1-213ENST00000620277 OTOP3Q7RTS5 596 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 ARPINQ7Z6K5 226 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 FBXW8Q8N3Y1 598 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 RNF169Q8NCN4 708 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 GORASP1Q9BQQ3 440 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 RHOBTB2Q9BYZ6 727 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 ERAP1Q9NZ08 941 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 GMPR2Q9P2T1 348 aaKnown RBP16.39■□□□□ 0.21
DKC1-213ENST00000620277 RUVBL2Q9Y230 463 aaKnown RBP16.39■□□□□ 0.21
DKC1-213ENST00000620277 XPO1O14980 1071 aaKnown RBP16.39■□□□□ 0.21
DKC1-213ENST00000620277 TSPAN1O60635 241 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 DNAJA2O60884 412 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 FKBP6O75344 327 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 NMBRP28336 390 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 USP10Q14694 798 aaKnown RBP16.39■□□□□ 0.21
DKC1-213ENST00000620277 LSM12Q3MHD2 195 aaKnown RBP16.39■□□□□ 0.21
DKC1-213ENST00000620277 ARL13AQ5H913 290 aaPredicted RBP16.39■□□□□ 0.21
DKC1-213ENST00000620277 DENND6AQ8IWF6 608 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 EXT2Q93063 718 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 RNF34Q969K3 372 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 LENG1Q96BZ8 264 aaPredicted RBP16.39■□□□□ 0.21
DKC1-213ENST00000620277 QKIQ96PU8 341 aaKnown RBP eCLIP16.39■□□□□ 0.21
DKC1-213ENST00000620277 FTHL17Q9BXU8 183 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 CYP3A43Q9HB55 503 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 ANLNQ9NQW6 1124 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 GTSE1Q9NYZ3 720 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 UBAP1Q9NZ09 502 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 VANGL2Q9ULK5 521 aa16.39■□□□□ 0.21
DKC1-213ENST00000620277 EEF2KO00418 725 aaKnown RBP16.38■□□□□ 0.21
DKC1-213ENST00000620277 BIRC5O15392 142 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 TSHRP16473 764 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 RALGDSQ12967 914 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 RWDD4Q6NW29 188 aaKnown RBP16.38■□□□□ 0.21
DKC1-213ENST00000620277 ARCQ7LC44 396 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 SLC41A1Q8IVJ1 513 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 MCUQ8NE86 351 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 B4GALNT2Q8NHY0 566 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 GRIN3AQ8TCU5 1115 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 SLC45A3Q96JT2 553 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 KCNK16Q96T55 309 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 ZDHHC2Q9UIJ5 367 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 FER1L6Q2WGJ9 1857 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 IGKV6-21A0A0C4DH24 114 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 CCL22O00626 93 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 KIF3CO14782 793 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 MT-CYBP00156 380 aaPredicted RBP16.38■□□□□ 0.21
DKC1-213ENST00000620277 PIK3R1P27986 724 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 GP5P40197 560 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms