RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 SMIM28A0A1B0GU29 152 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 TMEM63AO94886 807 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 CLPTM1O96005 669 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 MX2P20592 715 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ATICP31939 592 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ATN1P54259 1190 aaPredicted RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 EMC1Q8N766 993 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 CATSPER1Q8NEC5 780 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 GATA6Q92908 595 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 MPP4Q96JB8 637 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 SNX27Q96L92 541 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM210AQ96ND0 272 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 GAD1Q99259 594 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 XYLT2Q9H1B5 865 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 UNC93B1Q9H1C4 597 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 AGO3Q9H9G7 860 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 S100A14Q9HCY8 104 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 NGRNQ9NPE2 291 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 KRT82Q9NSB4 513 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM105AQ9NUU6 356 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ATXN10Q9UBB4 475 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 PLLPQ9Y342 182 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ZNF236Q9UL36 1845 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 TRIP12Q14669 1992 aaPredicted RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 APOL1O14791 398 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 KLF11O14901 512 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 CD4P01730 458 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 PROCP04070 461 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 RPLP2P05387 115 aaKnown RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 UQCRBP14927 111 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 RAG1P15918 1043 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 CST5P28325 142 aaPredicted RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 PTPN7P35236 360 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 RFC1P35251 1148 aaPredicted RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 CHN2P52757 468 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 MCCD1P59942 119 aaPredicted RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 FASTKD1Q53R41 847 aaKnown RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 TXNRD3NBQ6F5E7 133 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 DEFB107AQ8IZN7 70 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 DRAXINQ8NBI3 349 aaPredicted RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 STKLD1Q8NE28 680 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 ADAM2Q99965 735 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 EBF3Q9H4W6 596 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 GOLGA2P5Q9HBQ8 144 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 ARHGAP26Q9UNA1 814 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 HBS1LQ9Y450 684 aaKnown RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 M0QYV0 167 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 TRDMT1O14717 391 aaKnown RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 CHADO15335 359 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 CFLARO15519 480 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 TMCC1O94876 653 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 FGFR1P11362 822 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 ATP6V1B1P15313 513 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 VAV1P15498 845 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 XIAPP98170 497 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 WASHC5Q12768 1159 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 TBL3Q12788 808 aaKnown RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 CBLBQ13191 982 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 CYLC2Q14093 348 aaPredicted RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 PDK3Q15120 406 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 PPP6R3Q5H9R7 873 aaPredicted RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 ZNF618Q5T7W0 954 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 NXNQ6DKJ4 435 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 ARCQ7LC44 396 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 CDKL3Q8IVW4 592 aaPredicted RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 PGBD3Q8N328 593 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 PIWIL2Q8TC59 973 aaKnown RBP7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 PANX3Q96QZ0 392 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 CLIC5Q9NZA1 410 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 PPM1HQ9ULR3 514 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 USP18Q9UMW8 372 aa7.15□□□□□ -1.26
SRGAP3-213ENST00000618999 A0A1W2PQ45 241 aaPredicted RBP7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 A0A1W2PQY0 241 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 PPEF2O14830 753 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 GLRA3O75311 464 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 FAM155BO75949 473 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 APOEP02649 317 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 PDGFRBP09619 1106 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 TYK2P29597 1187 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 MLH1P40692 756 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 ASPAP45381 313 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 RPL10AP62906 217 aaKnown RBP7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 SLC18A2Q05940 514 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 OCLNQ16625 522 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 UBXN11Q5T124 520 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 LPCAT4Q643R3 524 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 CCSAPQ6IQ19 270 aaPredicted RBP7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 CCDC33Q8N5R6 958 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 TRIML2Q8N7C3 387 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 NAT14Q8WUY8 206 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 SENP6Q9GZR1 1112 aaPredicted RBP7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 NRDE2Q9H7Z3 1164 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 EPS15L1Q9UBC2 864 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 TMCO1Q9UM00 188 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 DNAH12Q6ZR08 3092 aa7.15□□□□□ -1.27
SRGAP3-213ENST00000618999 ZSWIM8A7E2V4 1837 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 TCRBV7S3A2A0A539 114 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms