RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 CLEC4DQ8WXI8 215 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 LPIN3Q9BQK8 851 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 RNF112Q9ULX5 631 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ASF1AQ9Y294 204 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ANKDD1BA6NHY2 528 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 KLHL41O60662 606 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 STIP1P31948 543 aaKnown RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ACAD10Q6JQN1 1059 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 FBXO38Q6PIJ6 1188 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 AGMOQ6ZNB7 445 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 SPATA20Q8TB22 786 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 TATDN2Q93075 761 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 CCDC124Q96CT7 223 aaKnown RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 BTN2A3PQ96KV6 586 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 PDZD7Q9H5P4 517 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ARMC7Q9H6L4 198 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 GNG14A0A1W2PPG7 69 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 GRXCR2A6NFK2 248 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 CCDC160A6NGH7 325 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 VSTM5A8MXK1 200 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 MAP3K6O95382 1288 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ZNF865P0CJ78 1059 aaPredicted RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 RBP3P10745 1247 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ATP6V1C1P21283 382 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 TXNDC8Q6A555 127 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ELAC1Q9H777 363 aaKnown RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 PDLIM7Q9NR12 457 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 RABGEF1Q9UJ41 708 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 DGKIO75912 1065 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ITGA8P53708 1063 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ZNHIT3Q15649 155 aaPredicted RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 WHAMMP3Q1A5X7 153 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ATG16L1Q676U5 607 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 C1orf54Q8WWF1 131 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 BAP1Q92560 729 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 GSDMCQ9BYG8 508 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ASB8Q9H765 288 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 TOPAZ1Q8N9V7 1692 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ANKRD63C9JTQ0 380 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 CES2O00748 559 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 PABPC1P11940 636 aaKnown RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 SCNN1AP37088 669 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ACAD11Q709F0 780 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 TAGAPQ8N103 731 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 DUSP16Q9BY84 665 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 RSPH9Q9H1X1 276 aaPredicted RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 UBP1Q9NZI7 540 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 AGO1Q9UL18 857 aaKnown RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 SUFUQ9UMX1 484 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 MEFVO15553 781 aaPredicted RBP11.13□□□□□ -0.63
POLR2A-209ENST00000617998 BTKQ06187 659 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 ANO5Q75V66 913 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 SLC22A17Q8WUG5 538 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 SALL3Q9BXA9 1300 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 FAM124BQ9H5Z6 455 aaPredicted RBP11.13□□□□□ -0.63
POLR2A-209ENST00000617998 CYLDQ9NQC7 956 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 MIEF1Q9NQG6 463 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 CNGB3Q9NQW8 809 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 PPP2R2CQ9Y2T4 447 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 MYADML2A6NDP7 307 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 RPP40O75818 363 aaKnown RBP11.13□□□□□ -0.63
POLR2A-209ENST00000617998 POP4O95707 220 aaKnown RBP11.13□□□□□ -0.63
POLR2A-209ENST00000617998 IL9RQ01113 521 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 ATP8A1Q9Y2Q0 1164 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 MAFBQ9Y5Q3 323 aaPredicted RBP11.13□□□□□ -0.63
POLR2A-209ENST00000617998 EDDM13A0A1B0GTR0 161 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 KPNA5O15131 536 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 ALPIP09923 528 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 MLIPQ5VWP3 458 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 AHI1Q8N157 1196 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 BSNDQ8WZ55 320 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 NDUFA10O95299 355 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 GJA5P36382 358 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 GNPDA1P46926 289 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 LMAN2Q12907 356 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 FOXC1Q12948 553 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 ITGA9Q13797 1035 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 SHC4Q6S5L8 630 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 IL27RAQ6UWB1 636 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 P4HA3Q7Z4N8 544 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 PRR11Q96HE9 360 aaPredicted RBP11.13□□□□□ -0.63
POLR2A-209ENST00000617998 PTPN18Q99952 460 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 CNOT10Q9H9A5 744 aaKnown RBP11.13□□□□□ -0.63
POLR2A-209ENST00000617998 MGAT4DA6NG13 374 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 SMIM22K7EJ46 135 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 VARSP26640 1264 aaKnown RBP11.13□□□□□ -0.63
POLR2A-209ENST00000617998 ACTR1BP42025 376 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 ACTR1AP61163 376 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 CAV1Q03135 178 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 SF3A3Q12874 501 aaKnown RBP eCLIP11.13□□□□□ -0.631e-6■□□□□ 11.3
POLR2A-209ENST00000617998 HDXQ7Z353 690 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 SERINC5Q86VE9 423 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 SCAIQ8N9R8 606 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 BBS4Q96RK4 519 aa11.13□□□□□ -0.63
POLR2A-209ENST00000617998 PACSIN2Q9UNF0 486 aaPredicted RBP11.13□□□□□ -0.63
POLR2A-209ENST00000617998 PIPSLA2A3N6 862 aa11.12□□□□□ -0.63
POLR2A-209ENST00000617998 NCF1BA6NI72 391 aaPredicted RBP11.12□□□□□ -0.63
POLR2A-209ENST00000617998 NCF1CA8MVU1 366 aaPredicted RBP11.12□□□□□ -0.63
POLR2A-209ENST00000617998 C22orf31O95567 290 aa11.12□□□□□ -0.63
POLR2A-209ENST00000617998 NCF1P14598 390 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms