RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 NXPE2Q96DL1 559 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 PIWIL1Q96J94 861 aaKnown RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 FAM81BQ96LP2 452 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 HEXIM2Q96MH2 286 aaKnown RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 TWNKQ96RR1 684 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 SPATS2LQ9NUQ6 558 aaKnown RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 AK5Q9Y6K8 562 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 CFAP46Q8IYW2 2715 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 ANKRD62A6NC57 917 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 TLX3O43711 291 aaPredicted RBP8.88□□□□□ -0.99
GPC6-202ENST00000617456 SEMA4FO95754 770 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 LATS1O95835 1130 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 CYBBP04839 570 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 PAEPP09466 180 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 PLA2G2AP14555 144 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 PECAM1P16284 738 aaPredicted RBP8.88□□□□□ -0.99
GPC6-202ENST00000617456 GRIA4P48058 902 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 BCAT1P54687 386 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 RAD23BP54727 409 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 GYS2P54840 703 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 MARSP56192 900 aaKnown RBP8.88□□□□□ -0.99
GPC6-202ENST00000617456 C21orf59P57076 290 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 CUL2Q13617 745 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 MEA1Q16626 185 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 INAVAQ3KP66 663 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 C6orf118Q5T5N4 469 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 PPP1R26Q5T8A7 1209 aaPredicted RBP8.88□□□□□ -0.99
GPC6-202ENST00000617456 HHATQ5VTY9 493 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 TMEM215Q68D42 235 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 ANKRD40Q6AI12 368 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 SYT10Q6XYQ8 523 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 ZNF605Q86T29 641 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 GATAD2AQ86YP4 633 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 DENND1CQ8IV53 801 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 GPT2Q8TD30 523 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 GANCQ8TET4 914 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 CYB5D2Q8WUJ1 264 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 KCTD13Q8WZ19 329 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 BIRC7Q96CA5 298 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 FCRL3Q96P31 734 aaPredicted RBP8.88□□□□□ -0.99
GPC6-202ENST00000617456 SLC2A11Q9BYW1 496 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 PCED1AQ9H1Q7 454 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 PRORYQ9H606 182 aa8.88□□□□□ -0.99
GPC6-202ENST00000617456 OLA1Q9NTK5 396 aaKnown RBP8.88□□□□□ -0.99
GPC6-202ENST00000617456 AGO1Q9UL18 857 aaKnown RBP8.88□□□□□ -0.99
GPC6-202ENST00000617456 SLC12A8A0AV02 714 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 FAM47DPA6NHR8 397 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 E9PAM4 449 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 TK2O00142 265 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 ENC1O14682 589 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 XPO1O14980 1071 aaKnown RBP8.87□□□□□ -0.99
GPC6-202ENST00000617456 RRP8O43159 456 aaKnown RBP8.87□□□□□ -0.99
GPC6-202ENST00000617456 PCDHGA12O60330 932 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 TSPAN3O60637 253 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 RFPL3O75679 317 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 FGFR1OPO95684 399 aaKnown RBP8.87□□□□□ -0.99
GPC6-202ENST00000617456 LDOC1O95751 146 aaPredicted RBP8.87□□□□□ -0.99
GPC6-202ENST00000617456 ZBED1O96006 694 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 C7P10643 843 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 CD58P19256 250 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 CD27P26842 260 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 HNF1BP35680 557 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 CTSKP43235 329 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 GCNT1Q02742 428 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 DNAJC3Q13217 504 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 EIF4HQ15056 248 aaKnown RBP8.87□□□□□ -0.99
GPC6-202ENST00000617456 CBWD6Q4V339 395 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 SGO2Q562F6 1265 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 CBWD3Q5JTY5 395 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 CBWD5Q5RIA9 395 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 TEX35Q5T0J7 233 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 RSRC2Q7L4I2 434 aaKnown RBP8.87□□□□□ -0.99
GPC6-202ENST00000617456 PACS2Q86VP3 889 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 FAM217AQ8IXS0 508 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 CPXM2Q8N436 756 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 ZNF557Q8N988 423 aaPredicted RBP8.87□□□□□ -0.99
GPC6-202ENST00000617456 RBBP8NLQ8NC74 664 aaPredicted RBP8.87□□□□□ -0.99
GPC6-202ENST00000617456 SEMA4DQ92854 862 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 CNDP2Q96KP4 475 aaKnown RBP8.87□□□□□ -0.99
GPC6-202ENST00000617456 BTBD1Q9H0C5 482 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 GDPD2Q9HCC8 539 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 CNGB3Q9NQW8 809 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 HOMER3Q9NSC5 361 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 QPCTLQ9NXS2 382 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 HESX1Q9UBX0 185 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 STOML2Q9UJZ1 356 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 STRIP2Q9ULQ0 834 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 ATP8A1Q9Y2Q0 1164 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 TMEM131Q92545 1883 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 CKAP5Q14008 2032 aa8.87□□□□□ -0.99
GPC6-202ENST00000617456 RTN2O75298 545 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 DNTTP04053 509 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 ITGAVP06756 1048 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 CCDC159P0C7I6 412 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 ABCB4P21439 1286 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 FMO5P49326 533 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 RPS14P62263 151 aaKnown RBP8.86□□□□□ -0.99
GPC6-202ENST00000617456 BST2Q10589 180 aaKnown RBP8.86□□□□□ -0.99
GPC6-202ENST00000617456 TARDBPQ13148 414 aaKnown RBP eCLIP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms