RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 EXOC1LA0A1B0GW35 172 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 FAM47DPA6NHR8 397 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 EDF1O60869 148 aaKnown RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 KRT1P04264 644 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 LHX1P48742 406 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 CHN2P52757 468 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 NR1H3Q13133 447 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 THOC5Q13769 683 aaKnown RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 ATP13A4Q4VNC1 1196 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 FYB2Q5VWT5 728 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 SMYD5Q6GMV2 418 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 OSTM1Q86WC4 334 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 C12orf29Q8N999 325 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 TFAP2BQ92481 460 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 TTC25Q96NG3 672 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 SLITRK1Q96PX8 696 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 DNAI2Q9GZS0 605 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 GPAMQ9HCL2 828 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 DSEQ9UL01 958 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 DNPEPQ9ULA0 475 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 LAMA3Q16787 3333 aa13.4□□□□□ -0.27
FOXN3-219ENST00000615335 UQCRBP14927 111 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 ACAT1P24752 427 aaKnown RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 TMED10P49755 219 aaKnown RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 CTC1Q2NKJ3 1217 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 DRICH1Q6PGQ1 229 aaPredicted RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 BORAQ6PGQ7 559 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 PACS1Q6VY07 963 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 TMEM173Q86WV6 379 aaPredicted RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 OR6Y1Q8NGX8 325 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 NSL1Q96IY1 281 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 SLC9A7Q96T83 725 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 PLGRKTQ9HBL7 147 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 MARCH5Q9NX47 278 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 TDRKHQ9Y2W6 561 aaKnown RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 TSC22D4Q9Y3Q8 395 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 WASF2Q9Y6W5 498 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 COL4A6Q14031 1691 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 TMEM191CA6NGB0 347 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 FBP2O00757 339 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 GABRDO14764 452 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 MED7O43513 233 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 OR6B1O95007 311 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 ZBED1O96006 694 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 ZSCAN5DPP0CG00 497 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 VDRP11473 427 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 CA8P35219 290 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 ARSEP51690 589 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 RPL7AP62424 266 aaKnown RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 PPIDQ08752 370 aaKnown RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 FAM171A1Q5VUB5 890 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 KCNT2Q6UVM3 1135 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 MFSD7Q6UXD7 560 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 NLRP9Q7RTR0 991 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 NET1Q7Z628 596 aaPredicted RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 TRABD2AQ86V40 505 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 PDSS2Q86YH6 399 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 HERC6Q8IVU3 1022 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 GLIS1Q8NBF1 620 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 PTCD3Q96EY7 689 aaKnown RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 TNIP3Q96KP6 325 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 DDX18Q9NVP1 670 aaKnown RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 INSL6Q9Y581 213 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 HEY1Q9Y5J3 304 aa13.39□□□□□ -0.27
FOXN3-219ENST00000615335 MRPL42Q9Y6G3 142 aaKnown RBP13.39□□□□□ -0.27
FOXN3-219ENST00000615335 SF3B1O75533 1304 aaKnown RBP eCLIP13.38□□□□□ -0.273e-6■■■■■ 137.9
FOXN3-219ENST00000615335 EIF3FO00303 357 aaPredicted RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 MAGEC1O60732 1142 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 HAUS5O94927 633 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 CYP11A1P05108 521 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 MMP8P22894 467 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 NFKBIAP25963 317 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 STIP1P31948 543 aaKnown RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 WDR4P57081 412 aaKnown RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 PSMC1P62191 440 aaKnown RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 COG7P83436 770 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 YWHAHQ04917 246 aaPredicted RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 TBL3Q12788 808 aaKnown RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 GPS1Q13098 491 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 ZBTB17Q13105 803 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 TRMT5Q32P41 509 aaKnown RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 ZNF362Q5T0B9 420 aaPredicted RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 OVOS1Q6IE37 1185 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 FUT10Q6P4F1 479 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 RASSF3Q86WH2 238 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 ALLCQ8N6M5 410 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 PHOSPHO2Q8TCD6 241 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 LPIN3Q9BQK8 851 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 GPR62Q9BZJ7 368 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 FAM49BQ9NUQ9 324 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 KIAA1257Q9ULG3 409 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 CCDC160A6NGH7 325 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 POC1B-GALNT4F8VUJ3 575 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms