RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 ZNF460Q14592 562 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 LSM12Q3MHD2 195 aaKnown RBP12.02□□□□□ -0.48
CDH5-208ENST00000614547 SUPT20HL1Q3ZLR7 823 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 CMPK2Q5EBM0 449 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 TBCELQ5QJ74 424 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 PCDH19Q8TAB3 1148 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 GATA5Q9BWX5 397 aaPredicted RBP12.02□□□□□ -0.48
CDH5-208ENST00000614547 C6orf203Q9P0P8 240 aaPredicted RBP12.02□□□□□ -0.48
CDH5-208ENST00000614547 PCDHA11Q9Y5I1 949 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 PDLIM1O00151 329 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 LTFP02788 710 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 SLC25A11Q02978 314 aaKnown RBP12.02□□□□□ -0.49
CDH5-208ENST00000614547 PCSK7Q16549 785 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 TAS1R3Q7RTX0 852 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 CAND1Q86VP6 1230 aaKnown RBP12.02□□□□□ -0.49
CDH5-208ENST00000614547 WDR49Q8IV35 697 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 PLD6Q8N2A8 252 aaKnown RBP12.02□□□□□ -0.49
CDH5-208ENST00000614547 IPMKQ8NFU5 416 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 GRIN3AQ8TCU5 1115 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 ACTRT2Q8TDY3 377 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 CDH19Q9H159 772 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 USP29Q9HBJ7 922 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 PCDH18Q9HCL0 1135 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 TRNAU1APQ9NX07 287 aaKnown RBP12.02□□□□□ -0.49
CDH5-208ENST00000614547 SIRPGQ9P1W8 387 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 CYTH4Q9UIA0 394 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 GLI3P10071 1580 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 NR5A2O00482 541 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 GNGT2O14610 69 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 GMNNO75496 209 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 PSME3P61289 254 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 POU6F1Q14863 301 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 CCDC92Q53HC0 331 aaPredicted RBP12.02□□□□□ -0.49
CDH5-208ENST00000614547 ARL13AQ5H913 290 aaPredicted RBP12.02□□□□□ -0.49
CDH5-208ENST00000614547 RPS27LQ71UM5 84 aaKnown RBP12.02□□□□□ -0.49
CDH5-208ENST00000614547 TMEM192Q8IY95 271 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 OR6P1Q8NGX9 317 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 CAMKK2Q96RR4 588 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 NT5C1AQ9BXI3 368 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 ADAMTS7Q9UKP4 1686 aa12.02□□□□□ -0.49
CDH5-208ENST00000614547 WNT10BO00744 389 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 BIRC5O15392 142 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 TFAP2AP05549 437 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 C2P06681 752 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 AOC1P19801 751 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 MAGEA10P43363 369 aaPredicted RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 ADGRE1Q14246 886 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 CSHL1Q14406 222 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 SURF1Q15526 300 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 UBR7Q8N806 425 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 CELF6Q96J87 481 aaKnown RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 ZNF512Q96ME7 567 aaPredicted RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 COL16A1Q07092 1604 aaPredicted RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 CLOCKO15516 846 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 BUD23O43709 281 aaKnown RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 SRP72O76094 671 aaKnown RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 PTPN1P18031 435 aaKnown RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 TCF7P36402 384 aaPredicted RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 BFSP2Q13515 415 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 KCNJ11Q14654 390 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 KLHL35Q6PF15 583 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 SIX6OS1Q8N1H7 587 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 TMCO5AQ8N6Q1 288 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 MAPK15Q8TD08 544 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 MFSD3Q96ES6 412 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 MTG1Q9BT17 334 aaPredicted RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 ACE2Q9BYF1 805 aaPredicted RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 DRC3Q9H069 523 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 KLHL25Q9H0H3 589 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 SDCBP2Q9H190 292 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 RMI1Q9H9A7 625 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 RNF181Q9P0P0 153 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 ARHGAP28Q9P2N2 729 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 SH3GLB1Q9Y371 365 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 WDR46O15213 610 aaKnown RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 SUPT7LO94864 414 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 DHRS4L1P0CG22 281 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 FGF3P11487 239 aaPredicted RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 ZNF23P17027 643 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 IL10P22301 178 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 PCYT1AP49585 367 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 RPL14P50914 215 aaKnown RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 ZNF143P52747 638 aaPredicted RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 LSM3P62310 102 aaKnown RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 ARFGAP1Q8N6T3 406 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 CERS2Q96G23 380 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 FBXL18Q96ME1 805 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 FRMD8P1Q9BZ68 369 aaPredicted RBP12.01□□□□□ -0.49
CDH5-208ENST00000614547 MID2Q9UJV3 735 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 ZNF229Q9UJW7 825 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 SORCS3Q9UPU3 1222 aa12.01□□□□□ -0.49
CDH5-208ENST00000614547 HEATR9A2RTY3 570 aa12□□□□□ -0.49
CDH5-208ENST00000614547 DFFAO00273 331 aa12□□□□□ -0.49
CDH5-208ENST00000614547 INPP4BO15327 924 aa12□□□□□ -0.49
CDH5-208ENST00000614547 PMPCBO75439 489 aa12□□□□□ -0.49
CDH5-208ENST00000614547 CDK4P11802 303 aa12□□□□□ -0.49
CDH5-208ENST00000614547 UGT1A6P19224 532 aa12□□□□□ -0.49
CDH5-208ENST00000614547 SNX16P57768 344 aa12□□□□□ -0.49
CDH5-208ENST00000614547 CDKL1Q00532 357 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms