RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 APBB2Q92870 758 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TOP1MTQ969P6 601 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PSMG2Q969U7 264 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TBC1D31Q96DN5 1066 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 RTP4Q96DX8 246 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 STAMBPL1Q96FJ0 436 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PGAP3Q96FM1 320 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 OXNAD1Q96HP4 312 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 FUBP3Q96I24 572 aaKnown RBP eCLIP3.52□□□□□ -1.85
LIG4-205ENST00000614526 ZNF333Q96JL9 665 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 EXOC2Q96KP1 924 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 C8orf48Q96LL4 319 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SERPINB11Q96P15 392 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 MLPHQ9BV36 600 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 TMEM109Q9BVC6 243 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 FOXP3Q9BZS1 431 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 RNF38Q9H0F5 515 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 C11orf49Q9H6J7 331 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ACSS3Q9H6R3 686 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 NT5MQ9NPB1 228 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SLCO1B3Q9NPD5 702 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CHRAC1Q9NRG0 131 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.52□□□□□ -1.85
LIG4-205ENST00000614526 RRN3Q9NYV6 651 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CXXC1Q9P0U4 656 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 RCOR3Q9P2K3 495 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 PSMC3IPQ9P2W1 217 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 RPS6KL1Q9Y6S9 549 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SHROOM3Q8TF72 1996 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 EYSQ5T1H1 3165 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 A0A0D9SEW6 157 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 E7ESA3 106 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 H7C4K7 107 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 CCL22O00626 93 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 HOXA2O43364 376 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 BUD23O43709 281 aaKnown RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 OPHN1O60890 802 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 IGLV3-25P01717 112 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 SLC4A1P02730 911 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 CXCL10P02778 98 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 PIRTP0C851 137 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 EN2P19622 333 aaPredicted RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 MX2P20592 715 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 ADRA1DP25100 572 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 ATP5DP30049 168 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 OR1E1P30953 314 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 FOXN2P32314 431 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 ELF1P32519 619 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 SERPINB6P35237 376 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 GLUD2P49448 558 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 PPIDQ08752 370 aaKnown RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 SLC10A7Q0GE19 358 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 SCAPQ12770 1279 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 TWF1Q12792 350 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 SEMA5AQ13591 1074 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 PARP6Q2NL67 630 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 CNKSR3Q6P9H4 555 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 LVRNQ6Q4G3 990 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 CEP128Q6ZU80 1094 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 LRRC6Q86X45 466 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 RELL1Q8IUW5 271 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 PSTKQ8IV42 348 aaKnown RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 LGI2Q8N0V4 545 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 SPPL2BQ8TCT7 592 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 TCP10LQ8TDR4 215 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 DCAKDQ8WVC6 231 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 TTC17Q96AE7 1141 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 ZNF669Q96BR6 464 aaPredicted RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 HMCESQ96FZ2 354 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 CHMP6Q96FZ7 201 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 FCRL3Q96P31 734 aaPredicted RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 SLC22A12Q96S37 553 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 AGAP2Q99490 1192 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 EBNA1BP2Q99848 306 aaKnown RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 GORASP1Q9BQQ3 440 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 UNKQ9C0B0 810 aaKnown RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 BRD8Q9H0E9 1235 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 CNOT10Q9H9A5 744 aaKnown RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 PNPLA8Q9NP80 782 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 ARHGEF38Q9NXL2 777 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 PLK2Q9NYY3 685 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 SAMD15Q9P1V8 674 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 IPO11Q9UI26 975 aaKnown RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 GRID1Q9ULK0 1009 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 PSAT1Q9Y617 370 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 VWA8A3KMH1 1905 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.51□□□□□ -1.85
LIG4-205ENST00000614526 CCDC195A0A1B0GUA6 201 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 FAM47DPA6NHR8 397 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 SDR42E2A6NKP2 422 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 GOLGA8CPA6NN73 597 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 HACD1B0YJ81 288 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 MAFKO60675 156 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 FAM107AO95990 144 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 HLA-DQB2P05538 268 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 ABHD2P08910 425 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 COL6A1P12109 1028 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 GLDCP23378 1020 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 ALDH1A3P47895 512 aa3.51□□□□□ -1.85
LIG4-205ENST00000614526 WDR5P61964 334 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms