RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 CDH23Q9H251 3354 aa14.14□□□□□ -0.15
TMEM254-213ENST00000613758 GFRA2O00451 464 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 CHKAP35790 457 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 TNNT3P45378 269 aaPredicted RBP14.13□□□□□ -0.15
TMEM254-213ENST00000613758 SGSHP51688 502 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 DRG2P55039 364 aaKnown RBP14.13□□□□□ -0.15
TMEM254-213ENST00000613758 CDH4P55283 916 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 USP4Q13107 963 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 UMODL1-AS1Q8N2C9 162 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 CPXM2Q8N436 756 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.13□□□□□ -0.15
TMEM254-213ENST00000613758 SMARCD2Q92925 531 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 ASB16Q96NS5 453 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 TRIM31Q9BZY9 425 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 RETREG1Q9H6L5 497 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 KIF9Q9HAQ2 790 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 FAM114A2Q9NRY5 505 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 ZNF212Q9UDV6 495 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 NEU2Q9Y3R4 380 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 HACD1B0YJ81 288 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 NCAM2O15394 837 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 GAS8O95995 478 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 OR1E1P30953 314 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 VIPR2P41587 438 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 MTHFRP42898 656 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 SLC45A4Q5BKX6 768 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 AFMIDQ63HM1 303 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 CDKL3Q8IVW4 592 aaPredicted RBP14.13□□□□□ -0.15
TMEM254-213ENST00000613758 ARHGAP12Q8IWW6 846 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 ALLCQ8N6M5 410 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 TDRD5Q8NAT2 981 aaKnown RBP14.13□□□□□ -0.15
TMEM254-213ENST00000613758 TSEN2Q8NCE0 465 aaKnown RBP14.13□□□□□ -0.15
TMEM254-213ENST00000613758 CCNYQ8ND76 341 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 TFB1MQ8WVM0 346 aaKnown RBP14.13□□□□□ -0.15
TMEM254-213ENST00000613758 RSAD2Q8WXG1 361 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 LGMNQ99538 433 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 SLC39A8Q9C0K1 460 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 VIPAS39Q9H9C1 493 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 GRHL1Q9NZI5 618 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 HPCAL4Q9UM19 191 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 SNX24Q9Y343 169 aa14.13□□□□□ -0.15
TMEM254-213ENST00000613758 BCLAF3A2AJT9 711 aaKnown RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 SGK1O00141 431 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 DFFAO00273 331 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 PPP1R12AO14974 1030 aaPredicted RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 TBL1XO60907 577 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 CLDN11O75508 207 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 MX2P20592 715 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 RBL1P28749 1068 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 STIP1P31948 543 aaKnown RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 RPL21P46778 160 aaKnown RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 MAPKAPK2P49137 400 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 NDST2P52849 883 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 GALNT2Q10471 571 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 PPP1R7Q15435 360 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 TTC39BQ5VTQ0 682 aaPredicted RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 ZDHHC24Q6UX98 284 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 SYDE1Q6ZW31 735 aaPredicted RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 HJURPQ8NCD3 748 aaPredicted RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 MYLIPQ8WY64 445 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 LRRC3BQ96PB8 259 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 QKIQ96PU8 341 aaKnown RBP eCLIP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 NOL6Q9H6R4 1146 aaKnown RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 USP29Q9HBJ7 922 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 ZDHHC18Q9NUE0 388 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 TBC1D14Q9P2M4 693 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 HELZP42694 1942 aaKnown RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 AP1B1Q10567 949 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 ZNF177Q13360 481 aaPredicted RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 HLTFQ14527 1009 aaKnown RBP eCLIP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 TPGS1Q6ZTW0 290 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 Q7L0L9 218 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 CHST9Q7L1S5 443 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 FAM71DQ8N9W8 422 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 RSPRY1Q96DX4 576 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 MYADMQ96S97 322 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 CDX2Q99626 313 aaPredicted RBP14.12□□□□□ -0.15
TMEM254-213ENST00000613758 BRD8Q9H0E9 1235 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 LINC00597Q9H2U6 94 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 TRPV4Q9HBA0 871 aa14.12□□□□□ -0.15
TMEM254-213ENST00000613758 A0A1B0GVM2 712 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 TYW5A2RUC4 315 aaKnown RBP14.11□□□□□ -0.15
TMEM254-213ENST00000613758 CFAP69A5D8W1 941 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 TCAF2A6NFQ2 919 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 KCNN4O15554 427 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 RRP9O43818 475 aaKnown RBP14.11□□□□□ -0.15
TMEM254-213ENST00000613758 IFNB1P01574 187 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 KRT14P02533 472 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 GARSP41250 739 aaKnown RBP14.11□□□□□ -0.15
TMEM254-213ENST00000613758 GDF10P55107 478 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 PRKD1Q15139 912 aaPredicted RBP14.11□□□□□ -0.15
TMEM254-213ENST00000613758 TRIP13Q15645 432 aaPredicted RBP14.11□□□□□ -0.15
TMEM254-213ENST00000613758 CCDC85BQ15834 202 aaPredicted RBP14.11□□□□□ -0.15
TMEM254-213ENST00000613758 MPPE1Q53F39 396 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 PRUNE1Q86TP1 453 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 MREGQ8N565 214 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 SMRP1Q8NCR6 262 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 DDI1Q8WTU0 396 aa14.11□□□□□ -0.15
TMEM254-213ENST00000613758 POMKQ9H5K3 350 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms