RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	AADAT	Q8N5Z0	425 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	ATP6V0D2	Q8N8Y2	350 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	GANC	Q8TET4	914 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	FRS2	Q8WU20	508 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	PTPRN2	Q92932	1015 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	SKA1	Q96BD8	255 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	APEX2	Q9UBZ4	518 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLC12A6	Q9UHW9	1150 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	PCDHGC3	Q9UN70	934 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	GPSM3	Q9Y4H4	160 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	APC2	O95996	2303 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508		A0A1B0GTQ1	180 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508		A0A1W2PP55	124 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	HSF2BP	O75031	334 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	GADD45B	O75293	160 aa	Predicted RBP	11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	RNASEH2A	O75792	299 aa	Known RBP	11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	MZF1	P28698	734 aa	Predicted RBP	11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	NUDT1	P36639	197 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	ADPRH	P54922	357 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	C21orf59	P57076	290 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	PITX1	P78337	314 aa	Predicted RBP	11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	CDK17	Q00537	523 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	TAF5	Q15542	800 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	C5orf22	Q49AR2	442 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	EFHC1	Q5JVL4	640 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	RABGAP1L	Q5R372	815 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	LAYN	Q6UX15	382 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	GBP6	Q6ZN66	633 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	ADAT2	Q7Z6V5	191 aa	Known RBP	11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	IRF2BP1	Q8IU81	584 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	STK40	Q8N2I9	435 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	GALNT15	Q8N3T1	639 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	ALG14	Q96F25	216 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	PPP1R13B	Q96KQ4	1090 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLC6A18	Q96N87	628 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	SPAG5	Q96R06	1193 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	PPP1R9B	Q96SB3	815 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	CPXM1	Q96SM3	734 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	OMD	Q99983	421 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	KDM4C	Q9H3R0	1056 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	CCDC86	Q9H6F5	360 aa	Known RBP	11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	ERVMER34-1	Q9H9K5	563 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	EBF2	Q9HAK2	575 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	ACP6	Q9NPH0	428 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	KIAA1468	Q9P260	1216 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	COL5A1	P20908	1838 aa	Predicted RBP	11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	PLXNB3	Q9ULL4	1909 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508	PTPRB	P23467	1997 aa		11.48	□□□□□ -0.57
CBWD1-222	ENST00000613508		A0A1W2PR77	199 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	FAM47DP	A6NHR8	397 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	KCNK3	O14649	394 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	YKT6	O15498	198 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLC7A4	O43246	635 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	ATP9B	O43861	1147 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	WNT1	P04628	370 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLC9A1	P19634	815 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	ABCB4	P21439	1286 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	PON1	P27169	355 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	CD38	P28907	300 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	DRD3	P35462	400 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	NNMT	P40261	264 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	STK19	P49842	368 aa	Predicted RBP	11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	CAMK2B	Q13554	666 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	EXOC3L4	Q17RC7	722 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	FBXL22	Q6P050	247 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	OLFML1	Q6UWY5	402 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLC26A9	Q7LBE3	791 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	DSG4	Q86SJ6	1040 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	DEFB106A	Q8N104	65 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	ZNF397	Q8NF99	534 aa	Predicted RBP	11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	RPL10L	Q96L21	214 aa	Known RBP	11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	NOX5	Q96PH1	765 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	ELF4	Q99607	663 aa	Predicted RBP	11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	FEM1A	Q9BSK4	669 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	CRACR2A	Q9BSW2	395 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	FAM204A	Q9H8W3	233 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	TMEM51	Q9NW97	253 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	DDIT4	Q9NX09	232 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	LHX6	Q9UPM6	363 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	TBC1D30	Q9Y2I9	924 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	CEP83	Q9Y592	693 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	PCDHGA1	Q9Y5H4	931 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	OR51B4	Q9Y5P0	310 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	ACACA	Q13085	2346 aa		11.47	□□□□□ -0.57
CBWD1-222	ENST00000613508	BAHCC1	Q9P281	2608 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508		E9PAM4	449 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	ALOX15B	O15296	676 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	IL1B	P01584	269 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	C1S	P09871	688 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	CDK4	P11802	303 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	PRKCSH	P14314	528 aa	Predicted RBP	11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	PDGFRA	P16234	1089 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	RXRG	P48443	463 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	PSMD8	P48556	350 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	SNX16	P57768	344 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	PTK2	Q05397	1052 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	OVGP1	Q12889	678 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	AUH	Q13825	339 aa	Known RBP	11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	SHB	Q15464	509 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms